Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU304499 |
| length | 535 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G257255 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 19357511 ~ 19361051 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403138.2 | lncRNA | upstream | 6663 | 19346311 ~ 19350848 (+) | True | LOC113530341 |
| TU304489 | lncRNA | upstream | 18675 | 19289920 ~ 19338836 (+) | True | G257245 |
| TU304474 | lncRNA | upstream | 45685 | 19260239 ~ 19311826 (+) | True | G257231 |
| TU304485 | lncRNA | upstream | 105714 | 19251445 ~ 19251797 (+) | True | G257242 |
| TU304477 | lncRNA | upstream | 111804 | 19243185 ~ 19245707 (+) | True | G257234 |
| TU304530 | lncRNA | downstream | 32486 | 19393537 ~ 19393903 (+) | True | G257283 |
| TU304535 | lncRNA | downstream | 42445 | 19403496 ~ 19405521 (+) | True | G257287 |
| TU304933 | lncRNA | downstream | 104679 | 19465730 ~ 19466227 (+) | True | G257609 |
| TU304932 | lncRNA | downstream | 105641 | 19466692 ~ 19470918 (+) | True | G257608 |
| TU304947 | lncRNA | downstream | 120059 | 19481110 ~ 19481575 (+) | True | G257623 |
| XM_034311659.1 | mRNA | upstream | 25537 | 19322799 ~ 19331974 (+) | True | atp6ap1b |
| XM_026920185.2 | mRNA | upstream | 47677 | 19295519 ~ 19309834 (+) | True | itih6 |
| XM_026920186.2 | mRNA | upstream | 47681 | 19301726 ~ 19309830 (+) | False | itih6 |
| XM_026920197.2 | mRNA | upstream | 63310 | 19286212 ~ 19294201 (+) | False | pfkfb1 |
| XM_034311885.1 | mRNA | downstream | 78385 | 19439436 ~ 19465336 (+) | True | ptpn22 |
| XM_026920204.2 | mRNA | downstream | 264478 | 19625529 ~ 19633180 (+) | False | si:ch73-206d17.1 |
| XM_026920800.2 | mRNA | downstream | 423520 | 19784571 ~ 19794997 (+) | True | zgc:158263 |
| XM_034311905.1 | mRNA | downstream | 478660 | 19839711 ~ 19848662 (+) | False | zbtb48 |
| XM_026920864.2 | mRNA | downstream | 479802 | 19840853 ~ 19848661 (+) | True | zbtb48 |
| trnae-cuc_34 | other | upstream | 324523 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304341 | other | upstream | 445797 | 18879568 ~ 18911714 (+) | False | fmnl3 |
| XR_004579712.1 | other | upstream | 2236570 | 17071136 ~ 17120941 (+) | False | itga5 |
| TU303060 | other | upstream | 2849131 | 16508025 ~ 16508380 (+) | True | G256046 |
| TU302910 | other | upstream | 2961299 | 16373242 ~ 16396212 (+) | False | LOC113530371 |
| TU304946 | other | downstream | 117251 | 19478302 ~ 19478895 (+) | True | G257622 |
| TU305571 | other | downstream | 1029758 | 20390809 ~ 20398714 (+) | True | G258096 |
| XR_003403172.2 | other | downstream | 1149193 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| XR_004579743.1 | other | downstream | 1542054 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | downstream | 1542096 | 20903147 ~ 20905073 (+) | False | ubxn10 |
