G262144


Basic Information

Item Value
gene id G262144
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 2191172 ~ 2191383 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU310667
GAAAACTGTTATAATTTATCATAACTTGTTATAACACAACCTATCATAAAACCTATTCTAAAATGCCATAACCGATTATAGCAATAATTTGGCATAATTCAGTAAACCTGTAATCCATCATATAACCTTGACTAACCTGTTTTAACATGATGAAAGGCTAGCGTAACTTGTTACCTAATCAGGCATATCTTGTCATAAAATCTTGTTATAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310667 True 212 lncRNA 0.30 1 2191172 2191383

Neighbor

gene id symbol gene type direction distance location
LOC117599398 LOC108276673 coding downstream 48842 2141227 ~ 2142330 (-)
LOC113544884 trpc7a,trpc7,LOC108277129,LOC108437819,LOC107677994,LOC107552051,LOC107720592,LOC105905985,LOC105029259 coding downstream 324313 1858028 ~ 1866859 (-)
etf1b etf1,LOC108437808,LOC108277127 coding downstream 335267 1848341 ~ 1855905 (-)
fbxw11b fbxw11,fbxw11b,LOC108277126,LOC105905987,LOC106603254,LOC107687420,LOC106568099 coding downstream 344341 1830087 ~ 1846831 (-)
LOC113544777 LOC108276596 coding downstream 383262 1800319 ~ 1807910 (-)
LOC113544897 LOC108276559,LOC108433260,LOC107730975,LOC107679534,LOC107688917,LOC107583395,LOC107758678,LOC107565277 coding upstream 49508 2240891 ~ 2285075 (-)
smfn rexo2,LOC107730958 coding upstream 112858 2304241 ~ 2309023 (-)
kirrel3a kirrel3,kirrel3a,LOC107730946,LOC107758686,LOC107565265 coding upstream 138022 2329405 ~ 2452032 (-)
LOC117599364 kcnj1,LOC108433247 coding upstream 463021 2654404 ~ 2654864 (-)
kcnj1b kcnj1,LOC108433247 coding upstream 464398 2655781 ~ 2657881 (-)
LOC113544895 NA non-coding downstream 34620 2149653 ~ 2156552 (-)
G262033 NA non-coding downstream 97237 2050035 ~ 2093935 (-)
LOC117599368 NA non-coding downstream 320252 1867804 ~ 1870920 (-)
G261893 NA non-coding downstream 334864 1856095 ~ 1856308 (-)
G261809 NA non-coding downstream 574148 1534239 ~ 1617024 (-)
G262368 NA non-coding upstream 313200 2504583 ~ 2504808 (-)
G262381 NA non-coding upstream 341508 2532891 ~ 2555181 (-)
LOC113544730 NA non-coding upstream 546450 2737833 ~ 2746531 (-)
G262572 NA non-coding upstream 663671 2855054 ~ 2855667 (-)
G262598 NA non-coding upstream 722281 2913664 ~ 2913871 (-)
G261868 LOC108276666,LOC108277182,LOC108277183,LOC108276665,LOC108277185 other downstream 410765 1775561 ~ 1780407 (-)
nlgn2b nlgn2,LOC108277041,LOC108443341,LOC107678031,LOC107720555,LOC107554306 other downstream 780233 1265452 ~ 1410939 (-)
lhfpl6 lhfp,LOC103046216,LOC107686123,LOC107691645,LOC107577306,LOC107751385,LOC107746987,LOC107589696,LOC108442104 other downstream 1078779 1015807 ~ 1112393 (-)
LOC117599327 NA other downstream 1158637 981406 ~ 1032535 (-)
si:ch73-1a9.3 NA other upstream 488292 2679675 ~ 2760185 (-)
LOC113544801 LOC108276863,LOC108433269 other upstream 521059 2712442 ~ 2724473 (-)
LOC113544717 LOC108276916,LOC108276915 other upstream 774272 2965655 ~ 2968182 (-)
akap1a NA other upstream 1376036 3567419 ~ 3627300 (-)
G263262 phf12 other upstream 1861606 4052989 ~ 4066383 (-)

Expression


Co-expression Network