G313655


Basic Information

Item Value
gene id G313655
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 2740382 ~ 2740586 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU371551
CTAAAAGCAAAATCAGGCATGTTaaattatgattttatgcacggaaaagaaaaataaggtCAGAAATGTGGTTAACAAAGAGTACAAAGGCTTTTCCAGTATAACacattaaaatggaaaaataaaaaactacatCGCTACGCACTAGTAAAAACATTCGGGAAAATCTTTGgttacactgtaataaaaagTCAGTCATTTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU371551 True 205 lncRNA 0.31 1 2740382 2740586

Neighbor

gene id symbol gene type direction distance location
mplkip mplkip coding downstream 9130 2728237 ~ 2731252 (-)
impa1 impa1,LOC103041306,LOC108435499,LOC105900623,LOC107674158,LOC107602533,LOC107688552,LOC107729422 coding downstream 73066 2662027 ~ 2667316 (-)
cdh7a cdh7,LOC108432272,LOC107584702,LOC107602530 coding downstream 230310 2422004 ~ 2510072 (-)
tesk2 tesk2 coding downstream 435982 2275585 ~ 2304400 (-)
si:ch73-382f3.1 si:ch73-382f3.1,LOC108280542,LOC103028992,LOC108432269,LOC107602516,LOC107674450 coding downstream 472186 2264673 ~ 2268196 (-)
inhbab inhba coding upstream 39253 2779839 ~ 2789522 (-)
afg3l2 afg3l2,LOC107589831,LOC108435493,LOC107689395,LOC107688430,LOC107585478 coding upstream 53272 2793858 ~ 2806513 (-)
ctdsplb ctdsplb,LOC108280637,LOC108435491,LOC107722544,LOC107589830,LOC107585460,LOC107688434 coding upstream 96510 2837096 ~ 2857358 (-)
vipr1a LOC108280844,LOC108435480 coding upstream 151855 2892441 ~ 2929528 (-)
si:dkey-29d8.3 LOC108280678 coding upstream 209442 2950028 ~ 2958611 (-)
G313647 NA non-coding downstream 5205 2734976 ~ 2735177 (-)
G313637 NA non-coding downstream 27000 2712992 ~ 2713382 (-)
G313339 NA non-coding downstream 319115 2421068 ~ 2421267 (-)
LOC117599961 NA non-coding downstream 482133 2252897 ~ 2258249 (-)
LOC117599960 NA non-coding downstream 487776 2248660 ~ 2252606 (-)
LOC117599940 NA non-coding upstream 2957 2743543 ~ 2746079 (-)
G313704 NA non-coding upstream 93907 2834493 ~ 2928703 (-)
G313706 NA non-coding upstream 107588 2848174 ~ 2848646 (-)
LOC113543292 NA non-coding upstream 505586 3246172 ~ 3298097 (-)
G313811 NA non-coding upstream 562140 3302726 ~ 3302957 (-)
fbxl7 fbxl7,LOC108280577,LOC107718179,LOC107689422,LOC107688519 other downstream 28217 2669218 ~ 2712165 (-)
G313307 dsel,LOC108432253 other downstream 415816 2319769 ~ 2324566 (-)
dlgap1a dlgap1,dlgap1a,LOC107584464,LOC107751362 other downstream 1394805 1272541 ~ 1345577 (-)
rbm33b NA other downstream 1688783 1005251 ~ 1051599 (-)
zbtb47a zbtb47b,znf652,LOC108280763 other upstream 137898 2878484 ~ 2888670 (-)
G313817 sall3,LOC108435487 other upstream 572718 3313304 ~ 3315092 (-)
fbxl4 fbxl4 other upstream 2059894 4800480 ~ 4817171 (-)
LOC113543250 znf236 other upstream 2222479 4963065 ~ 4996005 (-)
trnat-agu_14 NA other upstream 2479875 5220461 ~ 5220534 (-)

Expression


Co-expression Network