G316413


Basic Information

Item Value
gene id G316413
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 7695534 ~ 7695919 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU374748
atttcggactgcattgtgccgagtgtgaaatttggtggaggaggaattatggtgtggggttgtttttcaggagttgggcttggccccttagttccagtgaaaggaactttgaatgcttcaggataccaaaacattttggacaattccatgctcccaaccttgtgggaacagtttggagcgggccccttcctcttccaacatgactgtgcaccagtgcagaaagcaaggtccataaagacatggatgacagagtctggtgtggatgaacttgactggcctgcacagagtcctgacctgaacccgatagaacacctttgggatgaattagagcggagactgagagccaggccttctcgaccaacatcagtgtgtgacctcaccaatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU374748 True 386 TUCP 0.50 1 7695534 7695919

Neighbor

gene id symbol gene type direction distance location
trnau1apb tsp1l,LOC108428349,LOC107680226,LOC107589802,LOC107718075,LOC107722553,LOC107688461,LOC107585172 coding upstream 82750 7603361 ~ 7612784 (+)
LOC113543252 LOC108280221 coding upstream 120154 7568121 ~ 7575380 (+)
foxl2a foxl2 coding upstream 140609 7553561 ~ 7554925 (+)
rbp2a ret2,rbp2,LOC103044214,LOC108410483,LOC108239352 coding upstream 190837 7500421 ~ 7504697 (+)
LOC117595729 NA coding upstream 201715 7489370 ~ 7493819 (+)
lrrc6 lrrc6,LOC108280282 coding downstream 163105 7859024 ~ 7881717 (+)
kcnq3 kcnq3,LOC107749193 coding downstream 187976 7883895 ~ 7935093 (+)
LOC113543381 hhla1 coding downstream 245159 7941078 ~ 7953336 (+)
oc90 NA coding downstream 261124 7957043 ~ 7973996 (+)
adcy8 adcy8,LOC107569488,LOC107557810,LOC107659784,LOC107663336 coding downstream 374646 8070565 ~ 8130482 (+)
G316405 NA non-coding upstream 5569 7689377 ~ 7689965 (+)
G316398 NA non-coding upstream 23675 7671572 ~ 7671859 (+)
G316397 NA non-coding upstream 24014 7671290 ~ 7671520 (+)
G316396 NA non-coding upstream 24975 7670331 ~ 7670559 (+)
LOC117599993 NA non-coding upstream 45514 7648704 ~ 7650020 (+)
G316419 NA non-coding downstream 7803 7703722 ~ 7729737 (+)
G316630 NA non-coding downstream 348574 8044493 ~ 8044697 (+)
G316741 NA non-coding downstream 562910 8258829 ~ 8259070 (+)
LOC113543009 NA non-coding downstream 563339 8259258 ~ 8261712 (+)
G316752 NA non-coding downstream 635587 8331506 ~ 8331786 (+)
crsp7 LOC108280732 other upstream 97370 7582313 ~ 7598164 (+)
G316001 NA other upstream 560033 7133459 ~ 7135501 (+)
LOC113543138 LOC108280551,LOC108414043,LOC105006373 other upstream 750544 6937340 ~ 6944990 (+)
G315581 cldnj,LOC108280332,LOC108424024,LOC107749063,LOC107680085,LOC107551261,LOC107703975 other upstream 1468294 6226717 ~ 6227240 (+)
shox2 shox2,LOC107720426,LOC107598669,LOC107703017,LOC107709009,LOC107661335 other upstream 1793968 5894504 ~ 5901566 (+)
fitm1 fitm1,LOC107688462,LOC107585187,LOC107722554,LOC107589905 other downstream 55775 7751694 ~ 7756961 (+)
G316744 NA other downstream 567420 8263339 ~ 8264061 (+)
G316745 NA other downstream 572790 8268709 ~ 8269198 (+)
LOC117599964 LOC107387363,LOC107676291,LOC107756568 other downstream 1115676 8811595 ~ 8813410 (+)
G317390 NA other downstream 1716404 9412323 ~ 9415164 (+)

Expression


Co-expression Network