AMCG00000111


Basic Information

Item Value
gene id AMCG00000111
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 4243648 ~ 4280265 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000111
ATGAACTCAATTGCAGGGAATGCAGCCCGAGGACGGGACCCGGAGCAACGCAGGCTGGCGGTGGTTGAAGGTTGCCCTGGCAGAGGGACCCCGCTCTCTCTTGAGCTTAACCCCAGGAAGAGGCTCCAGTCGACGGAGGAGGCTCGATGCAGCAGTCGGCCGCCTCCAGAAGGAGCGGGATCTGTGAGCATATCAGAGTCGGGGCACTTCgagagaagagaaggaaagGGGAATTTGTGCAGAAAATGTCATCTGAAAGTCGAAGAGCTGAAGAAGCAAGCGCTCGCCCTGGCAGACCCTGGGTCATTCAAGCGCCGGCTCACCTCTCGCCGGCTAGCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000111 True 342 mRNA 0.59 3 4243648 4280265

Neighbor

gene id symbol gene type direction distance location
AMCG00000112 NA coding upstream 18566 4191834 ~ 4225082 (+)
AMCG00000114 NA coding upstream 108238 4131629 ~ 4135410 (+)
AMCG00000108 NA coding upstream 172214 4044112 ~ 4071434 (+)
AMCG00000109 myh6,LOC102786665,LOC103031694,LOC108251423,LOC107589804 coding upstream 234360 3998178 ~ 4009288 (+)
AMCG00000103 NA coding upstream 267225 3957641 ~ 3976423 (+)
AMCG00000110 NA coding downstream 44244 4324509 ~ 4354247 (+)
AMCG00000121 NA coding downstream 405324 4685589 ~ 4705926 (+)
AMCG00000120 NA coding downstream 476719 4756984 ~ 4760814 (+)
AMCG00000128 LOC107698615,LOC107568572 coding downstream 516104 4796369 ~ 4803426 (+)
AMCG00000126 NA coding downstream 526903 4807168 ~ 4809507 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding upstream 67932 4173437 ~ 4175716 (+)
G148143 NA non-coding upstream 81337 4160855 ~ 4162311 (+)
G148119 NA non-coding upstream 230245 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 364127 3876371 ~ 3879521 (+)
G148036 NA non-coding upstream 484645 3728325 ~ 3759003 (+)
G148200 NA non-coding downstream 302046 4582311 ~ 4582551 (+)
G148396 NA non-coding downstream 1073686 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 1102303 5382568 ~ 5388814 (+)
G148452 NA non-coding downstream 1260414 5540679 ~ 5544478 (+)
G148459 NA non-coding downstream 1397718 5677983 ~ 5678620 (+)
AMCG00000113 NA other upstream 50615 4112120 ~ 4193033 (+)
G148040 NA other upstream 483024 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 519332 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 544555 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 1839676 2403730 ~ 2403972 (+)
AMCG00000136 btbd7 other downstream 808174 5088439 ~ 5161195 (+)
AMCG00000145 NA other downstream 1026925 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 1054248 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 1154893 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 1600758 5881023 ~ 5888027 (+)

Expression


Co-expression Network