AMCG00002492 (tmem158,LOC102794155)


Basic Information

Item Value
gene id AMCG00002492
gene name tmem158,LOC102794155
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 16847424 ~ 16848116 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002492
ATGCTGAGTAACTCCCTGCTTCTGGTGCTGGCCATGACCGCCGCTCCCGGAGTCTTGCGGTGGTCCCACTGTTGGACAGACGAGGACTTGCTGCTGCCTCCGATCAACTCCTCCAACAGGTTCCTGGCCAACTTGGAGGTGGACGTGAGGTACGCCAAGAGATCCGTGGAAGGGAGCGAGTCGTCTTCCGAGACTTCGCTGCAGCCCCTGTGCAACATCAGCGTGCAGAGACTCATGCCCAACTCGCTGGTGGCTCGCTGGGACAAGCACTTCGGCTTCCAGTGCGATGTGCTCATCTACACCACCAACAACCACGGCAGGGCTTTCTTCTCCGCCGCTTTCAACCGGGTGGTCTCGCCTGTGGTCATCGAGCACTTGGGGGTGTCGGGCGGCCAGCAGGAGTTCAGGCTGTGTGTCGGCTGTGGGCTCTCCCGGAGCCGGCGCTTCGGCCAAGCCCGGTCCTACCCGCTGCAGGCAGGGGAGCCCCTGGGCTTCTGCTGCCTGGAGTTCGGCTTGGACGAGCTGAAAGGCGACAACAGCTGGAGACTGAACCGCAAGCCCATCGAGTCCACTTTGGTGGCCTGTTTCATGACTTTGGTGATCATTGTGTGGAGTGTGGCGGCCCTCATCTGGCCCGTCCCTATCATTGCAGGCTTTCTTCCAAATGGCATGGAGCAGAGGAGACAGAGATAA

Function

symbol description
tmem158 Predicted to enable peptide binding activity. Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 158

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002492 True 693 mRNA 0.61 1 16847424 16848116

Neighbor

gene id symbol gene type direction distance location
AMCG00002490 NA coding downstream 16153 16824229 ~ 16831271 (-)
AMCG00002491 zdhhc3,LOC103144443 coding downstream 34152 16792556 ~ 16813272 (-)
AMCG00002486 NA coding downstream 93928 16752548 ~ 16753496 (-)
AMCG00002488 NA coding downstream 112901 16689836 ~ 16734523 (-)
AMCG00002487 NA coding downstream 174845 16658898 ~ 16672579 (-)
AMCG00002505 NA coding upstream 173303 17021419 ~ 17052806 (-)
AMCG00002504 NA coding upstream 215291 17063407 ~ 17071925 (-)
AMCG00002508 mturn,LOC107572558,LOC107559763 coding upstream 232388 17080504 ~ 17090314 (-)
AMCG00002509 eaf1 coding upstream 244790 17092906 ~ 17097083 (-)
AMCG00002510 capn7,LOC107705521,LOC107755679 coding upstream 289060 17137176 ~ 17158023 (-)
G123527 NA non-coding downstream 192561 16653499 ~ 16654863 (-)
G123524 stt3b,LOC108412618 non-coding downstream 195970 16648407 ~ 16651454 (-)
G123489 NA non-coding downstream 364373 16481568 ~ 16483051 (-)
G123488 NA non-coding downstream 367131 16480029 ~ 16480293 (-)
G123452 NA non-coding downstream 720019 16124282 ~ 16127405 (-)
G123637 NA non-coding upstream 132715 16980831 ~ 16982646 (-)
G123642 NA non-coding upstream 147013 16995129 ~ 17050056 (-)
G123646 NA non-coding upstream 227196 17075312 ~ 17075549 (-)
G123705 NA non-coding upstream 386254 17234370 ~ 17238544 (-)
G123788 NA non-coding upstream 811951 17660067 ~ 17675110 (-)
G123585 NA other downstream 7702 16836156 ~ 16839722 (-)
G123263 NA other downstream 1901113 14941260 ~ 14946311 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 3193177 13649227 ~ 13654247 (-)
G122862 NA other downstream 3818018 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 4841072 11995828 ~ 12006352 (-)
AMCG00002503 NA other upstream 110046 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 841892 17690008 ~ 17706289 (-)
G123829 NA other upstream 1074336 17922452 ~ 17989465 (-)
AMCG00002533 ulk4,LOC107704090 other upstream 1085348 17933464 ~ 18041573 (-)
AMCG00002584 NA other upstream 4798939 21647055 ~ 21678545 (-)

Expression


Co-expression Network