Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003540 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 8979600 ~ 8982021 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006629 | lipid metabolic process | biological_process |
| GO:0016788 | hydrolase activity, acting on ester bonds | molecular_function |
| id | description |
|---|---|
| K23978 | IAH1; isoamyl acetate esterase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003540 | True | 732 | mRNA | 0.58 | 6 | 8979600 | 8982021 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003539 | cpsf3 | coding | upstream | 1757 | 8965711 ~ 8977843 (+) |
| AMCG00003542 | itgb1bp1 | coding | upstream | 20066 | 8958141 ~ 8959534 (+) |
| AMCG00003535 | NA | coding | upstream | 137181 | 8819412 ~ 8842419 (+) |
| AMCG00003533 | rnf144a,rnf144aa,LOC107752753,LOC106610698 | coding | upstream | 641950 | 8317038 ~ 8337650 (+) |
| AMCG00003532 | rsad2 | coding | upstream | 687382 | 8284827 ~ 8292218 (+) |
| AMCG00003545 | grhl1 | coding | downstream | 127820 | 9109841 ~ 9131160 (+) |
| AMCG00003543 | NA | coding | downstream | 158523 | 9140544 ~ 9144958 (+) |
| AMCG00003546 | rrm2,LOC107668265 | coding | downstream | 183665 | 9165686 ~ 9168941 (+) |
| AMCG00003547 | NA | coding | downstream | 190717 | 9172738 ~ 9179761 (+) |
| AMCG00003557 | NA | coding | downstream | 529543 | 9511564 ~ 9519396 (+) |
| G1375 | NA | non-coding | upstream | 135518 | 8843827 ~ 8844082 (+) |
| G1347 | NA | non-coding | upstream | 279046 | 8699466 ~ 8700554 (+) |
| G1343 | NA | non-coding | upstream | 312673 | 8661032 ~ 8666927 (+) |
| G1303 | NA | non-coding | upstream | 535576 | 8443740 ~ 8444024 (+) |
| G1291 | NA | non-coding | upstream | 639008 | 8340266 ~ 8340592 (+) |
| G1430 | ywhaqb,ywhaq,LOC105896734,LOC108436740,LOC107733143,LOC107674035,LOC107752793 | non-coding | downstream | 27276 | 9009297 ~ 9027632 (+) |
| G1574 | NA | non-coding | downstream | 718536 | 9700557 ~ 9703478 (+) |
| G1706 | NA | non-coding | downstream | 1254835 | 10236856 ~ 10238261 (+) |
| G1747 | ralgapa2 | non-coding | downstream | 1449643 | 10431664 ~ 10457765 (+) |
| G1855 | NA | non-coding | downstream | 2068130 | 11050151 ~ 11050644 (+) |
| AMCG00003541 | asap2,LOC106566627 | other | upstream | 37849 | 8900456 ~ 8941751 (+) |
| AMCG00003534 | id2,LOC106566577 | other | upstream | 327130 | 8649125 ~ 8652470 (+) |
| AMCG00003524 | rps7,LOC107668222 | other | upstream | 1475585 | 7498040 ~ 7504015 (+) |
| G1012 | NA | other | upstream | 2484695 | 6487692 ~ 6494905 (+) |
| AMCG00003480 | NA | other | upstream | 3644848 | 5303450 ~ 5334752 (+) |
| AMCG00003544 | NA | other | downstream | 93869 | 9075890 ~ 9106765 (+) |
| AMCG00003551 | NA | other | downstream | 273807 | 9255828 ~ 9263468 (+) |
| AMCG00003570 | NA | other | downstream | 795487 | 9777508 ~ 9781756 (+) |
| AMCG00003604 | NA | other | downstream | 2479642 | 11461663 ~ 11482931 (+) |
| AMCG00003606 | NA | other | downstream | 2508164 | 11490185 ~ 11491597 (+) |
