AMCG00003660


Basic Information

Item Value
gene id AMCG00003660
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13217541 ~ 13233616 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003660
ATGTCTTCCAAGTCACTACTCTGTAAACGCCTGCCTGGCTCCAATTTGTTCCCTGCACCACTGCGCTGTCACCACTGTGGAGGGGATTGGCAGCGTCACCACCAAGCTGCATCCTGTTCAGTCTTTATGGCTGCCGACTGTCTGCTCACATTGCTGTCAAAAGgaGGTAAACGAGTTGTAAGAATTGATGACAAGTTCTTTACCGGATATCGAAAAACAGCCGTAAAACCTGAGGAGGTCTTGCTATCTATTGAGATTCCTTACACACGGAAGGGGCAGTATTTCTCGGCCTACAAGCAGGCCCCACGCAGAGAGGATGACATCGCCATTGTGACCTGTGGAATGAACATCGTGTTTAAAGAGGGCACCACTATAGTGGAAGAGCTACATTTGAGTTATGGAGGAATGGCCGCAACCACTGTGCTCGCTCAAAATACTAGCAAACAACTTATAGGCAGGGAGTGGGATGAGGCGCTGCTGCAGAAGGCCTGCTCCTCTCTGGCTAAGGAGATGGACCTAGACCCCTCAGCCCCGGGAGGCCTGGTGCCCTACAGACGCACGCTGGCCCTTAGTCTCTTCTTTAAATTCTACCTCACTGTCAAGCGCAAGGGCATTCACGCTGAAGATATACGTGCCGATTACGCCAGCGCCACAGAGCTGTTTCACAAAGATTTCCCTTCCAGTGTTCAACTTTTCCAGGACATTCCAAAAGGCCAGCTGAAGCAGGATGTTGTTGGTCGGCCATTAATGCATCTGTCAGCCTTGAAGCAGGCCACCGGGGAAGCTGTGTACTGCGATGACATTCCCAGATATGAAAATGAGCTCTATCTGGCCCTGGTGACGAGCACAAAAGCACATGCAGAAATCCTCTCCATAGACACCAAACAAGCCATGGTGGTGCCTGGAGTAGTTAGCTTCCTGTCAGCTGAAGACATCCCTGGCAGCAACATCACTGGCGCAATAGTTTATGACGAAACAATCTTTGCCAAAGACAATGTCACATGTGTTGGTCACATTATCGGGGCAATTGTTGCTGACACTAAGGCCCATGCTCAAAGGGCAGCGAGAGCTGTGAAGATCAGTTATAAAAAACTGAAGCCAATCATCACAATCCAGgaTGCAATTGCAAGTCAATCATTTTATGAGCCAATCCGAAAGTTGGAGCGTGGAAACCCGAGCCAAGGATTCAAAGAATCAGATCACATAATAGAGGGAGAGATGCACATAGGAGGACAAGAACACTTCTACATGGAAACACACTGCTCTCTGGCTGTTCCCAAGAGTGAGGATGGAGAAATGGAGCTATTCGTGTCTACACAGTCTGCATCAAAGACGCAGGAACTTGTTGCCAAGGCCTTGGGAGTTCCCTCCAACAGGATCGTCTGCAGGGTGAAGAGGATGGGAGGTGGTTTTGGGGGAAAGGATACCAGGAGCACTCTTCTGTCGACGGTGGTGGCCATAGCAGCCCACAAAACAGGAAGACCTGTACGCTGCATGTTGGATCGCGATGAGGATATGTTCATAACTGGGGGTCGGCATCCCTTCCTGGGACGCTATAAGGTCGGCTTCATGAAGACTGGACGCGTTGTTGCTCTTGAACTGACTTTATACTCAAATGCGGGAAACTCTCTGGACCAGTCATTGTCAATCATGGAGATCGCTTTGTTCCACATGGAAAACTGCTACAATATCCCCCACATCAGTGGCACTGGCTACATGTGTAAGACCAACCTGCCCTGCAACAATGCCTTCCGTGGCTTTGGTAGGCCCCAGGGAATGATGGTAGCTGAGTGCTGGATGACCGATGTGGCAATGAAATGTTGCCTGCCTGCGGACCAGGTGCGCAAAATGAACATGTACAAGGAAGGAGATGTGACACCATTCAAACAGAAACTGGAGCAGTTCACCATTGCCCAATGCTGGGAGGAGTGCCTGCTGACCTCACAATACCACCAACGCAGGAAAGACATTGAAGAATTGAACAGGTAA

Function

GO: NA

KEGG:

id description
K00087 ygeS, xdhA; xanthine dehydrogenase molybdenum-binding subunit

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003660 True 1989 mRNA 0.50 16 13217541 13233616

Neighbor

gene id symbol gene type direction distance location
AMCG00003662 xdh,LOC104966294 coding downstream 5361 13117366 ~ 13212180 (-)
AMCG00003651 lin9,LOC107678835,LOC107726751,LOC107697095 coding downstream 151987 13055994 ~ 13065554 (-)
AMCG00003650 acbd3,LOC106571761 coding downstream 167149 13037692 ~ 13050392 (-)
AMCG00003645 NA coding downstream 249385 12926695 ~ 12968156 (-)
AMCG00003646 NA coding downstream 310652 12905372 ~ 12906889 (-)
AMCG00003661 NA coding upstream 457 13234073 ~ 13236047 (-)
AMCG00003658 wdr26,LOC103044372 coding upstream 17482 13251098 ~ 13270245 (-)
AMCG00003657 NA coding upstream 47835 13281451 ~ 13283514 (-)
AMCG00003659 adcy3,LOC107688975 coding upstream 56683 13290299 ~ 13316898 (-)
AMCG00003663 NA coding upstream 154191 13387807 ~ 13398847 (-)
G2287 NA non-coding downstream 39369 13172632 ~ 13178172 (-)
G2285 NA non-coding downstream 74013 13131620 ~ 13143528 (-)
G2266 NA non-coding downstream 116223 13100512 ~ 13101318 (-)
G2257 NA non-coding downstream 137520 13077648 ~ 13080021 (-)
G2235 NA non-coding downstream 183481 13033239 ~ 13034060 (-)
G2324 NA non-coding upstream 181245 13414861 ~ 13415156 (-)
G2337 NA non-coding upstream 274276 13507892 ~ 13508930 (-)
G2443 fzd3b,LOC107729283,LOC107734193,LOC107665105,LOC107589599,LOC108270052 non-coding upstream 1175620 14409236 ~ 14410253 (-)
G2444 LOC108270052,LOC108428681 non-coding upstream 1181763 14415379 ~ 14415673 (-)
G2445 NA non-coding upstream 1184962 14418578 ~ 14419732 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 100881 13071796 ~ 13116660 (-)
G2236 NA other downstream 182052 13034953 ~ 13035489 (-)
AMCG00003625 NA other downstream 1139389 12075319 ~ 12078152 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 1277758 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 1428266 11743989 ~ 11789275 (-)
AMCG00003667 NA other upstream 431127 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 775842 14009458 ~ 14013021 (-)
G2500 NA other upstream 1577170 14810786 ~ 14811331 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 2282057 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 3373794 16607410 ~ 16628401 (-)

Expression


Co-expression Network