AMCG00004326


Basic Information

Item Value
gene id AMCG00004326
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43113684 ~ 43114271 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004326
ATGCCAGCAGCGACTCTCTTGCCTTTCACAGCCACCCCGAGCAGGAAGTCTGCGAGCCCCAGCGTCTTTCGGCTGACGGAGaaattcattttacttttagttttcAGTGCTTTTATCACCCTGTGCTTCGGGGCGATCTTCTTCCTGCCGGACTCCTCCAAGCTGCGCGTTTTCTTCCACTCGTCCTCGGTGGAGGCGGACCCCGGCAAGACAGGTACGGAGAACGAGTCCGTCGTCGGCGGAGCGGGGGACGAGGAGCCCAAGTTGGCCAAGATACGGAGAGACCACGACAATGCGCTGAAGGAGGCGACGGACACCCTCCAGAAGCAGCCGGGGGATATCAAGAAGGAGATCCAGAGCGAGAAGGATAAACTGCCCCATGACGGTGCGGGCAAAGGGGGCAAGGGCAGCCTACCCCATATTGAGTATCAGAGGCCCCCGGGGGCTGCGGGGCGTGAACCTCCAGACCCGGAAACCAGGGAGAGGAGGGCGAAGATCAAGGAGGTGAGTCCGGCTGACCTGCGCGCCTCCTCGGTGGCTGGGCCAGCTCGTCGCCGAACCGGTTTAACGGGTTTTAAAAACGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004326 True 588 mRNA 0.60 1 43113684 43114271

Neighbor

gene id symbol gene type direction distance location
AMCG00004321 NA coding upstream 137899 42927068 ~ 42975785 (+)
AMCG00004318 serinc1,LOC107598085,LOC107716862,LOC107675084 coding upstream 377115 42732816 ~ 42736569 (+)
AMCG00004315 NA coding upstream 478716 42591866 ~ 42634968 (+)
AMCG00004314 NA coding upstream 537126 42548340 ~ 42576558 (+)
AMCG00004308 acat2,LOC107696107,LOC107726488,LOC107732634,LOC107601581,LOC107693222,LOC107549121,LOC102788057 coding upstream 758284 42350231 ~ 42355400 (+)
AMCG00004328 man1a1,LOC107833082,LOC106959811,LOC103360425,LOC107083523 coding downstream 42797 43157068 ~ 43177059 (+)
AMCG00004327 man1a1,LOC102782693,LOC106607779 coding downstream 101835 43216106 ~ 43234293 (+)
AMCG00004331 NA coding downstream 181381 43295652 ~ 43317408 (+)
AMCG00004330 fam184a,LOC106607780,LOC106571378 coding downstream 215101 43329372 ~ 43338860 (+)
AMCG00004329 LOC107549683 coding downstream 236508 43350779 ~ 43362687 (+)
G7293 NA non-coding upstream 637798 42475576 ~ 42475886 (+)
G7288 NA non-coding upstream 733723 42376625 ~ 42379961 (+)
G7278 NA non-coding upstream 748030 42364868 ~ 42365654 (+)
G7272 sod2,LOC102787761 non-coding upstream 777041 42333425 ~ 42336643 (+)
G7231 NA non-coding upstream 1024031 42087791 ~ 42089653 (+)
G7418 NA non-coding downstream 121547 43235818 ~ 43237653 (+)
G7441 NA non-coding downstream 232079 43346350 ~ 43346959 (+)
G7485 NA non-coding downstream 477479 43591750 ~ 43595078 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding downstream 964074 44078345 ~ 44088037 (+)
G7584 NA non-coding downstream 1222180 44336451 ~ 44336681 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 422575 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 897322 42210430 ~ 42216362 (+)
G7094 NA other upstream 1606453 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 2772449 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 5265964 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 1503914 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 2847739 45962010 ~ 45968306 (+)
G7999 NA other downstream 5032617 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 5782846 48897117 ~ 49026355 (+)
G8099 NA other downstream 5818179 48932450 ~ 48934095 (+)

Expression


Co-expression Network