AMCG00004704


Basic Information

Item Value
gene id AMCG00004704
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56897603 ~ 56910267 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004704
ATGCGGAAGTCGGGACAAGCGGAACGGTTTGCCTCTGTGGCCCCTCCACGGCCCAAGAGCCCCAACGCCTCCTCTGGCCAATCGGTAGCCAGCACTGCCGTGATTGGACGGGTGGGGGAGATGCCTCCGCCTCCACCATCAGTAGCAGAAGacttcccgcccccccccccaccactggATGACTCTGACCTGCCGGCCCCGCCCCCGGAATGCAGCCCCCCTGATTCTGATGCCTCGTCCCCAGTCTTCCcagcccctcctcctccctaCGACGACTTCCCATCACCCCCTGGGGCCGAGGCCGGGCTGCCCTCTCCccccccgccgccgccgcctcctccccctcccccccctcctcccccaccccctgctcccCCCGTCGCTTCTGGTAACACACAGaggGCTCTGGAGAAACAGACCAGTTTTGACAAGCAGCTGGACTCTCTAACAGACCTGCTCAGTGACATGGAGGCTAGATCGCCATTCACCCCCAAGGTTCCGACCTTTGACCCAGCCCGTGTGACCCTGAAGCCTGCGGCACCCCCCCCAAAGGCCCCCAAGCCTGCCCTGTCCTTCCTGCCCCCAGCTGACTCGCTGGACCGCCCCCCCCCTGCGCCCTGGGCCCAGGAGCTGCGTGCGCGACAGAAGCCATCTAGCCTGGCCTTCTCCAATCAGAGCGCAGCCCCGGCCACCACTCAGGCCCCAGTGGCCAACAAGAGCTCCTTCCCAGCCCCTGCTACCGCCTTCGCCACTAAACCGGCCATCTCGGTTCCCTTGGCCAATCGGAGCCCTCTCCCGTCTGTCACTCAGGCCCAGGCAGCCAATAAGGCCCCGATTGTGGCCCCTAAGCCGGCTCCGGTCAATCATAGCCCCTTTTCAGGCGCCAATCAGCGTCCCCTGGCCAATCAGGGCTCTGCACCCAGTTTCTCCACTTCTAAGGTTGTGAGTGATCCTCCCTTGACCAACAAGAGCCCCTTCTCAGGCTCCTTCCCCTCTGCTTCCTCCTCTGCCTTTGTCCCGCCCCCTCCAGCAGCCAGTCAACCCGCCCTAACCAAGCAGAGTTCCCCCTTTACTCCCAGCGCTGTCAGTCAAGCCtcgtctcctcctcctcctccaatgGGCTTCCAGCAGACCCCAAGCCCTGCCTCCCAGCCGAAGACCATGACCTCGATCTCCCCCAGACAGCCAATGGGAGCAGGCGGTCAGAAGACCcctggctctggctctggctctggctctggctctggGGTTCCCCTGTCCCTGAGGGAagtggaggagctggagaagctGACCCAGGGCTTCATCAAGGACATGGAGAATGCTGCCCCCTTGCCCTCCACCCACACAGAGCTGTGTGGTCAGTGCGGTCAGCCCCTGTCACGCTGCTCCCCTGCGGTCAGCGCTCTGAACATGCTCTTCCACTCGGAGTGCTTCGTGTGTGCGGCCTGCCAGCGCCCCCTGCAGGGCATGCACTTCTACCAGCGCGCCGAGCGCCCACACTGCGAGGACTGCTACAACgcCTCTCTGGAGCAGTGCAGCGAGTGCGGAGAGAGGATCACCGACAAGGTGCTGAAGGCAGTGGGCCGCTGCTTCCATGCCAACTACCCCGGCAGGGAGGAGACGATCCGGGTCGTGGCGCTGGAAAAGAACTTTCACCTCAAGTGTTACCGCTGTGAGGACTGTTCCCGCCCCCTGTCCATCCAGGCGGACACTGAAGGCTGTTACCCTCTGGAGGGACGCATTCTCTGTCTCAAGTGCCACACCCACCGCGCCAAGCAGGCCGCGCATTGATTGGCTGAGCTCCCTGTCTGTCAGACGCTGCAATTTAGAGAAACCTACATATAATAGAGGgtagggagagcgagagaggcaTATGCACAGAAAGAGAAGCAGAACTATTTCTATCTCCAGCTATAgctcccctctctttctctctctctctctctctctccttctctccccatttatttttctctctatcaccgacacacacagagagagggatggagggaggggatGCCggggggagaagagagagagagaggaatgaagAGACTCCAGTCAGGTTGCTGAGCGCTCTTGTTTAActgaatattaatatgaatagaataatattaaattaattattgcagTAATTATGTAACTCAATCTCCACTTCACGAACTGTAGAAGAGTCTGATCGATCAAaatcaattagttaattaaaataatttggtaATTGGAAAAAGTAAACCGGAGTTCAAAGCTTTGTATCTGTACAGTATCTGTCTTCCAGAGCTGCGTGGAGggatggaggagaggagaggagaggaggatatACACAGTGTTAAAGGGCTTTAATTACAAAGAGGCTGAATCTCAGAACAAATAAATGGTGTTGAATGTGCCAGCCAGCGAACAGCCAGCGAACTGTTCCCAGAACCAAGACCGAACGGTTAATGTATTAGCATCTTCATTTAAGATGCAGATATCAGTGGAATGAGTGTTTGAGTGAGTGTGAGCAAGAGACAGTGTGAGTGTTAAATACCAATAGAAAATGCCTTAAGAGGATGTAGCAGTGTGGGATCATGGGAAATGCAGTCTTCCTCACAGATGGGTGGACTCCATCTCCCACAGTCCTCAGTCACTCAATACAGTGAGGGTCTGTAAGAGTGTGACTATATGACACTGCAAGggactacatttcccacaatcctggggggcagaggaggaggggagtgATTCACTGTTTTTTTTGGAAGGGAGAGTTGTTTCCCAAACAATAGAGAGTTTGACAATCCATTTCCCACAAtctgtccctccctcctccaGCCTGACACACTAACTCACCCTGTGATTGGTTACTGGAGGGGGGCGGGGCGCATGTGGAGCGGCCAGCCCTGGGGGGTTGTGTTAATTGTGCATCTTGGTGTGGGTCTGCACTGCAGGCCCTGTGTGAGCAGCTTCACCGAATGTGAACTATCTGAACTATTGAATGTctctgtgattattattaatctttattattattattattattacatttattattttgaggctgtttttttcttagctgaaatattgtaataatgcaCCTGTTATATCTGCCAGAGCAGTCCAGTCCAATAGAGTATCATATGGACCAGATCAGTGCAATACAGTTAATAGTACAGCAGTACAATACTGTAGCATATAATGCATTGCTGTGCAGACCAGTATATTAGTGGTCCAATCCAGaccagtgtagtacagtaccgTGCCAAAAGCCAGTGTAAGTACAGCACACCACACTGCAGTATAGTGCACtagaatacagtatattacactatAGTCCAGTACAGAACTGTACCATCCTGCAGTCAAATACAGTCCAGTATTGCACAGCCCAGTCCAGTGTCATACTGTGCCATCCAGACCAGTCCAGTATTATATAGGGTACTGGATACAGCCCCTGCAGTATATGACAGTCCAGTGTGTTAATCATACACACAACTCCCACTCGTATATACAATTAGAATGACGGTTCTGTCATGTCCGTACCGCAGCGTGTGGGTGTTGTGTCAGTGTACAGAGGGAGTGCGTTGTATCGGTGGGAGAGCGACACAGCCACAGTGTCAAAATCATTCCCCAGGCACCTACGCTGCAGCCAGTCCCGCTCTCTGCCCCCGTCCCGAGACCGGCTCTGGTTCAGCCCATCTCCGCTGGGTCCACACTCCTGCACTGGCCCACATGCTGTCATTGTACTCCTATAATTATGTGTATGATTATGATTTGTATTGGGGATCTGTGTGCTtctattaataatgatgatgtcTCGGCATTCCTTATTAACATTTGCTACatgttttagcatttttttttttttttttttacctttttgtattttcttgtcatGCCCATGGGCGTCCACAACGCTGCTTCAGAAATAAATTCTAACTGAACACAACCCTGTTCTGTGTCCGTCAATCagcgtgtcagtcagtctgtgtggtgagagagggagtggggggggagggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004704 True 3996 mRNA 0.54 10 56897603 56910267

Neighbor

gene id symbol gene type direction distance location
AMCG00004697 NA coding downstream 38997 56856356 ~ 56858606 (-)
AMCG00004699 NA coding downstream 44557 56846683 ~ 56853046 (-)
AMCG00004698 NA coding downstream 60669 56825021 ~ 56836934 (-)
AMCG00004689 NA coding downstream 159354 56735843 ~ 56738249 (-)
AMCG00004693 NA coding downstream 191789 56705344 ~ 56705814 (-)
AMCG00004706 NA coding upstream 23130 56933397 ~ 56956495 (-)
AMCG00004708 NA coding upstream 64852 56975119 ~ 56982616 (-)
AMCG00004705 NA coding upstream 127220 57037487 ~ 57050034 (-)
G10083 NA non-coding downstream 2984 56683137 ~ 56894619 (-)
G10135 NA non-coding downstream 35960 56860337 ~ 56861643 (-)
G10084 NA non-coding downstream 76817 56762045 ~ 56820786 (-)
G10116 NA non-coding downstream 143212 56753025 ~ 56754391 (-)
G10108 NA non-coding downstream 183415 56712389 ~ 56714188 (-)
G10123 NA other downstream 105442 56788752 ~ 56792161 (-)
G10121 NA other downstream 119134 56777126 ~ 56778469 (-)
G10079 NA other downstream 122163 56772502 ~ 56775440 (-)
G10115 NA other downstream 146640 56747791 ~ 56750963 (-)
AMCG00004690 NA other downstream 205897 56690719 ~ 56691706 (-)
G10157 NA other upstream 115270 57025537 ~ 57028915 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_08947581_08961131 ZYX coding CI01000016 null 8946148 ~ 8961131 (-)
tiger barb (Puntius tetrazona) G81512 NA misc NC_056709.1 CM032078.1 12817753 ~ 13057881 (-)
mexican tetra (Astyanax mexicanus) G89690 zyx,LOC108428910 unknown NC_035906.1 CM008309.1 9894825 ~ 9901700 (-)