G862


Basic Information

Item Value
gene id G862
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 5340461 ~ 5341987 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1029
tacttttcatttctgtgcattttacaaAATCCTGTGGATTTTGTGGGTGAAAGTGTAGGAGAAAACCTGATCACGTACCCTCtagttttaatttacacaatgttaaatgttattctaatttaaaagaaatgtgcaaTATCTCCTTGTTTACCAAATCATGTCTGAACTCCCACTCATTTGAATAAGTAGTGCTTTACAAAGTCACACTGGACGCCTTATGAGCTGACCCTGATCTCCTCAATCCACCCAATCCACACACCAGGTCACGCTGAAGGAAACCCTCTGTCCATTGAAATGGATAAGAGCCCAATCAATTCCCACATGCGGGTTCAGTCAGACTCTGACTTACAGAAAGCCAGGAACTGTTCCAGGAACAATCGGGAGAGAAAGGAAGATTGTACACCCACTTTAGAGTGAAGCTGCTGTGATGCTTTTGAGTCCCCGTTGAATTCCTGATTGCCCTCTGCCTTCACGTTCACAGCGGCGCTCTGTTAGCTCTCCTGTTCTGGGACAGACTGCTCTGTTTACAGCGCTCTGCTGCCTGTGTTGTATTACTCTGAGATGAATGGGGCCTGAACTGCATGCGCCTACAGTGATGCTAAGCAATCACCCTGCATAGGAGCAGCAGCTTATTAAGACTGTTAATTGGCCCTCATTAATGCACGATGTAAACGTACATCATTCTCACATACTTTAAAATCTACATTCTGATTCCAAGGAAGGTGATTTGTATGTTATTGTGATATGATATTACTGAGAGGGCTGATGTGTGATGTAAAGCTTgctttctaaaatgaaaagacaTGCCAGTGATTGTACCATTTCTTCTGTCGTTACACTCGTTGTGACCCTCTCCCATTGTCTGGACAAAGGCTCGTTTTGTAGAAAATCCTACTGCTTTTTATAAtctggataagtgtccacctctttttattttctttagttaaCTGACATCTAAAGCACATTGGGAATgaccttttatatatatattttttttacatgtataaaaataaatggaaaaaaaacaatgaattggTGAGGAAATGTTTGGTAACAGATTTCATATTCTTTCAAGCATCTGATCATTAACAAACAGatgcagaataataatatatcaaagCACAGATGTAAGAAAACCCCATTAAACATCTTTTTGTATGGTGTTTGTAAGTCCTGACTGTTGCTCCAAACAAGCACTTTGAAATTCACAAATCGACCTTCATTAGCAGGGTGCAGATGTGTGCAGCTTTGTGTAGGAGTGATCTGGTACCACGTGAAAAACACTGACATAGATGGGATTTGCTGGAGGATGAGAACTTCTTTCATCTTAATCATTACATTGAAGTCCTCAGACACCATGAAGAGAATAACACCCAGTGATCAAGAGGTTTCCATCATCCATCATTCAGTCAGTGTCTGGTAATGTGAGATAGGGCTTCACAAAGTGACCTCAGTATTTACTGTGCTGTACGTGGAAGTTGACTTATTTCTGTAATCtgcaataacaattaaaacaaacggCAAGTg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1029 True 1527 lncRNA 0.54 1 5340461 5341987

Neighbor

gene id symbol gene type direction distance location
AMCG00003479 NA coding downstream 114990 5190549 ~ 5225471 (-)
AMCG00003477 NA coding downstream 185866 4879820 ~ 5154595 (-)
AMCG00003471 NA coding downstream 774901 4562401 ~ 4565560 (-)
AMCG00003472 NA coding downstream 787227 4547613 ~ 4553234 (-)
AMCG00003470 NA coding downstream 817463 4521548 ~ 4522998 (-)
AMCG00003482 NA coding upstream 15599 5357586 ~ 5358050 (-)
AMCG00003483 NA coding upstream 19100 5361087 ~ 5373418 (-)
AMCG00003486 NA coding upstream 66811 5408798 ~ 5413661 (-)
AMCG00003488 kbtbd11 coding upstream 211494 5553481 ~ 5555742 (-)
AMCG00003489 NA coding upstream 291475 5633462 ~ 5733437 (-)
G845 NA non-coding downstream 5703 5330726 ~ 5334758 (-)
G844 NA non-coding downstream 10687 5329572 ~ 5329774 (-)
G811 NA non-coding downstream 200216 5132700 ~ 5140245 (-)
G804 NA non-coding downstream 208760 5131467 ~ 5131701 (-)
G786 NA non-coding downstream 358241 4982019 ~ 4982220 (-)
G942 NA non-coding upstream 410090 5752077 ~ 5755468 (-)
G946 NA non-coding upstream 446081 5788068 ~ 5788321 (-)
G961 NA non-coding upstream 487460 5829447 ~ 5829749 (-)
G982 NA non-coding upstream 613117 5955104 ~ 5955319 (-)
G993 NA non-coding upstream 644578 5986565 ~ 5986975 (-)
AMCG00003476 NA other downstream 531472 4583142 ~ 4808989 (-)
AMCG00003459 NA other downstream 1444937 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 1801494 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 1910189 3394657 ~ 3430272 (-)
AMCG00003422 NA other downstream 2901640 2427397 ~ 2438821 (-)
AMCG00003484 NA other upstream 2083 5344070 ~ 5356468 (-)
AMCG00003550 NA other upstream 3667130 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 4511212 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 4532683 9874670 ~ 9878444 (-)
AMCG00003587 naa20 other upstream 5283359 10625346 ~ 10633112 (-)

Expression


Co-expression Network