G908


Basic Information

Item Value
gene id G908
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 5557607 ~ 5558515 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1088
GTCCTAGATGTGGATATAAATGCCACCAAGTCTGCATTCCCCCATGGCCTTGTGCATTTTTAGGCACATTTCCTCTACAATAAAATCTACAATACCCGCATGGAGTTATTCATGTGGCCGGTTGTCACATTCTGTAATAAccacaaaaaaagcaaatatatgGTCTTCATACATTACAATATCTGGACAGCttcaaagaacaaaacagaatgtGCATTTCATCGATGCTTCGTCTCCAGGTGAATCCCTTGCATGACACTGAATGATACTTACATGATCTCCCCAGTTAACACACCACGTTCCCACAACCTTGTAGCAACATAATATTGTTAGCTGGGTCAGTGCGCTATAGTAGTTGTAGTATATCGTCAAAGGATCCAGGGAATCTCTTCCACAAAGCTCCGTTATGTAACCAGGTGCTGTTCAATACGCAGAGTCCAGTGTAACTGACCACGGCGGTCGTAAACTACAGCCCCACTATTCCTGGTCAAAGCGAGCGCTTTAATCGGCCCTGGCAGCCGCTTTCACTCCTGTCCACTCGGGGTACAAGAAACGAGCTCGCAGGACGTGGCACCGACGTCTAGCGATTTGAAGGCAGGATCCACGCAAAGCCCGGCATCTGAATTGACACCGTGTTGCTGGAATGGAAATCATCCGAGAATAGAAATCCGCAGATCAACCATGTCTGTAACCAGCGAAACGCGGCAGTTCACACACAAACCCACTCTATTGTTTTATTCACTTTAGAGGAACATGTTTTGGTTTGACATTAGGGGACGGGCGTGTTTTAATCAAGCCACGCCTGCTTTTTATTAACCCTACACTACACACTGTATGGGCGTGAGAATTGAGTTACATtcctgcgcacacacacacacacacacacacacacacacacacacacacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1088 True 909 lncRNA 0.49 1 5557607 5558515

Neighbor

gene id symbol gene type direction distance location
AMCG00003487 NA coding upstream 50700 5463759 ~ 5506907 (+)
AMCG00003485 NA coding upstream 155067 5379028 ~ 5402540 (+)
AMCG00003481 NA coding upstream 217760 5335491 ~ 5339847 (+)
AMCG00003478 LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 coding upstream 370334 5175015 ~ 5187273 (+)
AMCG00003475 NA coding upstream 862270 4689484 ~ 4695337 (+)
AMCG00003495 NA coding downstream 193628 5752143 ~ 5753261 (+)
AMCG00003498 NA coding downstream 208843 5767358 ~ 5769937 (+)
AMCG00003497 NA coding downstream 266066 5824581 ~ 5825732 (+)
AMCG00003496 NA coding downstream 355956 5914471 ~ 5915592 (+)
AMCG00003500 NA coding downstream 708386 6266901 ~ 6267507 (+)
G907 kbtbd11 non-coding upstream 1301 5550745 ~ 5556306 (+)
G752 NA non-coding upstream 1003962 4552898 ~ 4553645 (+)
G742 NA non-coding upstream 1073337 4483890 ~ 4484270 (+)
G690 NA non-coding upstream 1177788 4326653 ~ 4379819 (+)
G684 NA non-coding upstream 1182668 4296559 ~ 4374939 (+)
G960 NA non-coding downstream 270944 5829459 ~ 5829745 (+)
G983 NA non-coding downstream 397089 5955604 ~ 5955820 (+)
G990 NA non-coding downstream 427523 5986038 ~ 5986394 (+)
G1146 NA non-coding downstream 1514889 7073404 ~ 7073609 (+)
G1187 NA non-coding downstream 1806429 7364944 ~ 7365477 (+)
AMCG00003480 NA other upstream 222855 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 1035207 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 1102465 4452564 ~ 4455142 (+)
G1012 NA other downstream 929177 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 1939525 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 3090610 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 3341941 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 3517375 9075890 ~ 9106765 (+)

Expression


Co-expression Network