G9941


Basic Information

Item Value
gene id G9941
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56846054 ~ 56899913 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12354
ttttttatttaaaataatgcagataAAATGGAACAGGAAGTCAAACAGGTGCCACATCGGTGAGGTCATCAACGAGCACCAGAAAGTCAAACCTTCACGTTTGCAGGAGCCCCTGTTGTGGGGTCAGGGCCTACTTCTTCCACAATCCCCTGTGGGAGAGGCAATACTGCGGTGTCCCGCTGAAAAATAACTAGTTTTCGTCGGTATTGGCAGAATGTGTAAGAAAAAAGATTAACAGGAGAGGCTGGGCTGCACTGCGGCTGGCTGCCTATTGTGAAGGGGTTGATGGGAGATGCAGTCTTTGAAAATGGCTCTtgatacagaaatgtatataaaaaacaaactgcagaaaCTACAAATCCCTCAAGTCTCGGCGTCAGTCTGGACACCGTGCTCCCTGTGGGCTGGCAGAGGGCTAGTCATGTCTCTTATCAGCACTGATGTAAGTGACATGAAAAATCAACCCCACACTTTTAGGCTGCAAAGGATGCTGGGAAGTGTATTCTTTCCCATCAAGGAAATACGAGGCAAAATAAGGAAAGAACAACAGAAGTCCTAGGAGCCTCTGGGGCGCCTCCACCGCCAACTCCCACACAGTCCGCCTGCAAGGCATTCTGGAAGCCAGAGTCTCATTGGCCACCTGGGTTCTTCTGCATCTTCTTAAACttcttgaatttgtttttaccCATTCTGTTCTTCTTCACAGAGCTCACCCTCTTCCTCTTCTCAAACCTGTTCCCTCCCTTCactccctccttcctctccttcacaccatctcctccctcctctccctcctcctccttgtcTTCCTTCTGTTCCTGCTTCTTCTTCAGAGCCACCTCTTTCTTCTGCTTCTCTTTTTGGCTGACTTTCTCCTTCCCCCTTTTCGCCACCCTTCCTTCTCCTCCCATCTCTCCCTGTGGCACCTGCCTCTTGCCcgtgacctttgacccctgCATGGGAGAGGTTGTTGGGGCAGAACCTGCCTCTGTCTTCTTCTCTGAGGGGTCGCCCTCCTCcgctgagagaaaaaaaaaaaaagtaaaaaaaaaaaaaaaaaaatgctaaaacatGTAGCAAATGTTAATAAGGAATGCCGAgacatcatcattattaatagaAGCACACAGATCCCCAATACAAATCATAATCATACACATAATTATAGGAGTACAATGACAGCATGTGGGCCAGTGCAGGAGTGTGGACCCAGCGGAGATGGGCTGAACCAGAGCCGGTCTCGGGACGGGGGCAGAGAGCGGGACTGGCTGCAGCGTAGGTGCCTGGGGAATGATTTTGACACTGTGGCTGTGTCGCTCTCCCACCGATACAACGCACTCCCTCTGTACACTGACACAACACCCACACGCTGCGGTACGGACATGACAGAACCGTCATTCTAATTGTATATACGAGTGGGAGTTGTGTGTATGATTAACACACTGGACTGTCATATACTGCAGGGGCTGTATCCAGTACCCTATATAATACTGGACTGGTCTGGATGGCACAGTATGACACTGGACTGGGCTGTGCAATACTGGACTGTATTTGACTGCAGGATGGTACAGTTCTGTACTGGACTatagtgtaatatactgtattctaGTGCACTATACTGCAGTGTGGTGTGCTGTACTTACACTGGCTTTTGGCAcggtactgtactacactggtCTGGATTGGACCACTAATATACTGGTCTGCACAGCAATGCATTATATGCTACAGTATTGTACTGCTGTACTATTAACTGTATTGCACTGATCTGGTCCATATGATACTCTATTGGACTGGACTGCTCTGGCAGATATAACAGGtgcattattacaatatttcagctaagaaaaaaacagcctcaaaataataaatgtaataataataataataataaagattaataataatcacagagACATTCAATAGTTCAGATAGTTCACATTCGGTGAAGCTGCTCACACAGGGCCTGCAGTGCAGACCCACACCAAGATGCACAATTAACACAACCCCCCAGGGCTGGCCGCTCCACATGCGCCCCGCCCCCCTCCAGTAACCAATCACAGGGTGAGTTAGTGTGTCAGGCtggaggagggagggacagaTTGTGGGAAATGGATTGTCAAACTCTCTATTGTTTGGGAAACAACTCTCCCTTCCAAAAAAAACAGTGAATcactcccctcctcctctgccccccaggattgtgggaaatgtagtccCTTGCAGTGTCATATAGTCACACTCTTACAGACCCTCACTGTATTGAGTGACTGAGGACTGTGGGAGATGGAGTCCACCCATCTGTGAGGAAGACTGCATTTCCCATGATCCCACACTGCTACATCCTCTTAAGGCATTTTCTATTGGTATTTAACACTCACACTGTCTCTTGCTCACACTCACTCAAACACTCATTCCACTGATATCTGCATCTTAAATGAAGATGCTAATACATTAACCGTTCGGTCTTGGTTCTGGGAACAGTTCGCTGGCTGTTCGCTGGCTGGCACATTCAACACCATTTATTTGTTCTGAGATTCAGCCTCTTTGTAATTAAAGCCCTTTAACACTGTGTatatcctcctctcctctcctctcctccatccCTCCACGCAGCTCTGGAAGACAGATACTGTACAGATACAAAGCTTTGAACTCCGGTTTACTTTTTCCAATtaccaaattattttaattaactaattgattTTGATCGATCAGACTCTTCTACAGTTCGTGAAGTGGAGATTGAGTTACATAATTActgcaataattaatttaatattattctattcatattaatattcagTTAAACAAGAGCGCTCAGCAACCTGACTGGAGTCTcttcattcctctctctctctcttctccccccGGCatcccctccctccatccctctctctgtgtgtgtcggtgatagagagaaaaataaatggggagagaaggagagagagagagagagagagaaagagaggggagcTATAGCTGGAGATAGAAATAGTTCTGCTTCTCTTTCTGTGCATAtgcctctctcgctctccctacCCTCTATTATATGTAGGTTTCTCTAAATTGCAGCGTCTGACAGACAGGGAGCTCAGCCAATCAATGCGCGGCCTGCTTGGCGCGGTGGGTGTGGCACTTGAGACAGAGAATGCGTCCCTCCAGAGGGTAACAGCCTTCAGTGTCCGCCTGGATGGACAGGGGGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12354 True 3208 lncRNA 0.46 2 56846054 56899913

Neighbor

gene id symbol gene type direction distance location
AMCG00004696 NA coding upstream 2324 56841116 ~ 56843730 (+)
AMCG00004694 NA coding upstream 25265 56814414 ~ 56820789 (+)
AMCG00004687 NA coding upstream 67628 56775205 ~ 56778426 (+)
AMCG00004688 NA coding upstream 116221 56724853 ~ 56729833 (+)
AMCG00004686 NA coding upstream 125979 56712353 ~ 56720075 (+)
AMCG00004701 LOC103393816,LOC101468857,LOC106519603 coding downstream 15409 56915322 ~ 56926198 (+)
G9932 NA non-coding upstream 72336 56765053 ~ 56773718 (+)
G9930 NA non-coding upstream 86808 56758684 ~ 56759246 (+)
G9923 NA non-coding upstream 110666 56733305 ~ 56735388 (+)
G9914 NA non-coding upstream 124373 56680396 ~ 56721681 (+)
G9942 NA non-coding downstream 8263 56908176 ~ 56954608 (+)
G9978 NA non-coding downstream 59321 56959234 ~ 56959738 (+)
G9988 NA non-coding downstream 115968 57015881 ~ 57019723 (+)
G9989 NA non-coding downstream 125599 57025512 ~ 57027870 (+)
AMCG00004695 gapdh,LOC107596669 other upstream 44162 56785852 ~ 56801892 (+)
G9889 NA other upstream 303991 56538254 ~ 56542063 (+)
AMCG00004681 NA other upstream 346470 56490093 ~ 56499584 (+)
AMCG00004673 NA other upstream 486257 56315612 ~ 56359797 (+)
AMCG00004650 NA other upstream 1044786 55758271 ~ 55801268 (+)
AMCG00004707 NA other downstream 61600 56961513 ~ 57002024 (+)
G9982 NA other downstream 86993 56986906 ~ 56987644 (+)

Expression


Co-expression Network