G7441


Basic Information

Item Value
gene id G7441
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43346350 ~ 43346959 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9148
gtattagtatggtgttcctaataatcctttaggtgagtgtatatatatacatatcctCCTGTTTGATCTGGAGTGTAAATTAAAAACGGATGTTAAGATTGTCTTTATAGCTGCAATAAGTGGATATCTAGGGTATTAGAGGCCTGGGGCATTCATATAGCATTATGGGAAATAGAAAGACTTTCTCTCTTGCCTTATTgcataatcatatatatatatacacactttatgtatatatacatatataggcaTATCAATGTCAAGAGAGagattattacattaaaatgagcatCAACAAAAATAGTGGAATTCTTCCATTGTACCACAGAAGTTTTATGGGAAACATATGAACCCCCTGCATGACACTGCATTATGACCCTGCCTAATGCACAAGGTCAAACTATCAGAtatggatgtgtttgtgtgtgctctaTTTTGTGCCAGGGGATTTGACACCGGTCTGCTGCAGTACCCCCTCTCTAGTGCTCTCGGTTACAATGCACGACAGCTATACCCTGCATGCTGCGAGTCCCGTTTTCAATCAAGTGTTTGGATTTTCATTCTTCATTAAGtacaaaatgatttttttgAAGTGGACAGCAAACCttac

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU9148 True 610 lncRNA 0.40 1 43346350 43346959

Neighbor

gene id symbol gene type direction distance location
AMCG00004330 fam184a,LOC106607780,LOC106571378 coding upstream 7490 43329372 ~ 43338860 (+)
AMCG00004331 NA coding upstream 28942 43295652 ~ 43317408 (+)
AMCG00004327 man1a1,LOC102782693,LOC106607779 coding upstream 112057 43216106 ~ 43234293 (+)
AMCG00004328 man1a1,LOC107833082,LOC106959811,LOC103360425,LOC107083523 coding upstream 169291 43157068 ~ 43177059 (+)
AMCG00004326 NA coding upstream 232079 43113684 ~ 43114271 (+)
AMCG00004329 LOC107549683 coding downstream 3820 43350779 ~ 43362687 (+)
AMCG00004332 NA coding downstream 33711 43380670 ~ 43411096 (+)
AMCG00004335 NA coding downstream 180021 43526980 ~ 43534658 (+)
AMCG00004342 gopc,LOC106607787,LOC107603060,LOC107678854 coding downstream 263822 43610781 ~ 43611095 (+)
AMCG00004338 LOC106571388,LOC106607787 coding downstream 278656 43625615 ~ 43631896 (+)
G7418 NA non-coding upstream 108697 43235818 ~ 43237653 (+)
G7293 NA non-coding upstream 870464 42475576 ~ 42475886 (+)
G7288 NA non-coding upstream 966389 42376625 ~ 42379961 (+)
G7278 NA non-coding upstream 980696 42364868 ~ 42365654 (+)
G7272 sod2,LOC102787761 non-coding upstream 1009707 42333425 ~ 42336643 (+)
G7485 NA non-coding downstream 244791 43591750 ~ 43595078 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding downstream 731386 44078345 ~ 44088037 (+)
G7584 NA non-coding downstream 989492 44336451 ~ 44336681 (+)
G7614 NA non-coding downstream 1183381 44530340 ~ 44543143 (+)
G7638 NA non-coding downstream 1227372 44574331 ~ 44574997 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 655241 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 1129988 42210430 ~ 42216362 (+)
G7094 NA other upstream 1839119 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 3005115 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 5498630 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 1271226 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 2615051 45962010 ~ 45968306 (+)
G7999 NA other downstream 4799929 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 5550158 48897117 ~ 49026355 (+)
G8099 NA other downstream 5585491 48932450 ~ 48934095 (+)

Expression


Co-expression Network