G145268


Basic Information

Item Value
gene id G145268
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 14778238 ~ 14791127 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182730
ctttcaaaaatagacatgttaatagattgtatttatcaattaactaaatgcaaagtgagtgaacagaagaaacatctacatcaaatcaatatttggtgtgaccaccctttgccttcaaaacagcatcaattcttctaggttcacttgcacacagtttttgaaggaactcggcaggtaggttggcccaaacatcttggagaacgaaccacagttcttctgtggatttaggtgcctcagttgcttctctctcttcatgtaatcccagacagactcgatgatgttgagatcagggctctgtgggggccataccatcacttccaggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182730 True 324 lncRNA 0.42 2 14778238 14791127

Neighbor

gene id symbol gene type direction distance location
AMCG00005080 NA coding upstream 6841 14745805 ~ 14771397 (+)
AMCG00005068 LOC102781441,LOC101470867,LOC108433095,LOC102203003 coding upstream 208700 14567840 ~ 14569538 (+)
AMCG00005067 NA coding upstream 221129 14553621 ~ 14557109 (+)
AMCG00005066 NA coding upstream 233542 14526676 ~ 14544696 (+)
AMCG00005063 NA coding upstream 302331 14452742 ~ 14475907 (+)
AMCG00005079 rnf2,LOC107677769,LOC107718134,LOC107693737 coding downstream 8978 14800105 ~ 14805904 (+)
AMCG00005078 NA coding downstream 22734 14813861 ~ 14836483 (+)
AMCG00005097 NA coding downstream 110683 14901810 ~ 14964384 (+)
AMCG00005095 ptgs2,LOC108442416 coding downstream 207210 14998337 ~ 15003107 (+)
AMCG00005094 NA coding downstream 247311 15038438 ~ 15041265 (+)
G145251 NA non-coding upstream 100641 14676709 ~ 14677597 (+)
G145147 NA non-coding upstream 573726 14204134 ~ 14204512 (+)
G145067 NA non-coding upstream 1204778 13573242 ~ 13573460 (+)
G145039 NA non-coding upstream 1460386 13315378 ~ 13317852 (+)
G145017 NA non-coding upstream 1519162 13257717 ~ 13259076 (+)
G145278 NA non-coding downstream 47457 14838584 ~ 14861156 (+)
G145281 NA non-coding downstream 54961 14846088 ~ 14852741 (+)
G145307 NA non-coding downstream 181983 14973110 ~ 14975386 (+)
G145369 NA non-coding downstream 303842 15094969 ~ 15097012 (+)
G145379 NA non-coding downstream 335459 15126586 ~ 15128571 (+)
AMCG00005060 LOC106599426 other upstream 589909 14155155 ~ 14188329 (+)
G144940 NA other upstream 1997068 12780580 ~ 12781170 (+)
G144677 NA other upstream 3114870 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 4762814 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 5027461 9700167 ~ 9750777 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 588472 15379599 ~ 15384811 (+)
G145932 NA other downstream 2974130 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 4023902 18815029 ~ 18821642 (+)
AMCG00005232 dock7 other downstream 4684012 19475139 ~ 19530453 (+)
G146305 NA other downstream 4788446 19579573 ~ 19579807 (+)

Expression


Co-expression Network