G155431


Basic Information

Item Value
gene id G155431
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13273640 ~ 13274693 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195790
gacaatatttcattttattagtaataaaacagtgcatttacatttcctttttttcctttttcaatatttataaacCTGTCTCCACATTCTTCAGGGTGAAATCTTTAAGATCACATAGAGATTTAACACATACATGTTCCTCTTTTCCAATGGCATTGTTTTCCACAAAGAAATCCGCGGGAGCCTTTTTCGTAAACACAGggatgatacatttaaaaaagcaggaATGTGGATGTCCTATTCATGTCAGGAGCAGCAAACCCAGAGCTCCTGTGTGCATTagatattgtatataaaaaaaagacattccattcaaaataaatacacactccTACCTGTACGCCTCACTCGTATGATGCCATGTCTAAAGGTTATTAAATAAAcgcaatacaaatacaatccaAACGGTTTTCCATAGGCTACGCAGTCCACGGCTTTGGTTACAGTTGGTCACCCCACACCCACACAGCGTTGGCATCAACTGGCACGAGCATTTGACACCGCTAAGGAAATCTGGCGGGAAAATGACTTTTGACTTCTTTCTTTTCTCGAAGTATATGCATAGATTTTTATTCAACAGGCTACAGTTTGTGTCCCCCTTTTCCCAGAGCTAATATTCCTGAAGGgcatgttttcttgtgtgttgttgttggctGGTTTTCCAATCATTATTATGAGAGATCAGCTAATAAAGTCAACAGACACAACATGTTACACTAGTCCAACACATTAAATCAACCGTTTGGGGTAAATAAGAGTTCAGATTAAACCAAATCCAGAAGACAGTGGTCGTATGAAATCACTGTAGACCGTGGATGGTCTGTATATGATCTCAGTGAGTGGGCTCCCTTGTGGCAATGGCTGATGGGAAAAGCTCTAATTCTTTCACTTCCTCCAAACCCTTCTGagaaaacacatgtatttctgTTGGTCTATTTTGAGACACAGATATCAGAAATGTAAGCTGTACATTGCATAGACACATTAGGgaagttttaaaaaacaaacagatacatttattaAGACTTCCCCACATATAGCATTTGTTCATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195790 True 1054 lncRNA 0.38 1 13273640 13274693

Neighbor

gene id symbol gene type direction distance location
AMCG00005944 NA coding downstream 22952 13247754 ~ 13250688 (-)
AMCG00005943 NA coding downstream 28853 13240482 ~ 13244787 (-)
AMCG00005947 NA coding downstream 92104 13172886 ~ 13181536 (-)
AMCG00005948 NA coding downstream 102620 13169077 ~ 13171020 (-)
AMCG00005967 polr2e,LOC107599482,LOC107669821 coding downstream 248023 13022361 ~ 13025617 (-)
AMCG00005945 tmem161a coding upstream 4610 13279303 ~ 13284728 (-)
AMCG00005924 slc25a42,LOC108239543 coding upstream 110490 13385183 ~ 13387394 (-)
AMCG00005952 NA coding upstream 118965 13393658 ~ 13396684 (-)
AMCG00005953 NA coding upstream 187523 13462216 ~ 13462560 (-)
AMCG00005976 NA coding upstream 256183 13530876 ~ 13533884 (-)
G155429 NA non-coding downstream 6478 13266963 ~ 13267162 (-)
G155426 NA non-coding downstream 21151 13252122 ~ 13252489 (-)
G155400 NA non-coding downstream 165573 13107812 ~ 13108067 (-)
G155391 NA non-coding downstream 166147 13079485 ~ 13107493 (-)
G155390 gpx4,gpx4b,gpx4a,LOC107723219 non-coding downstream 240232 13028204 ~ 13033408 (-)
G155502 NA non-coding upstream 189762 13464455 ~ 13465588 (-)
G155503 NA non-coding upstream 192277 13466970 ~ 13484019 (-)
G155521 NA non-coding upstream 400516 13675209 ~ 13677337 (-)
G155550 NA non-coding upstream 511313 13786006 ~ 13787634 (-)
G155591 NA non-coding upstream 602030 13876723 ~ 13881170 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 117322 13123557 ~ 13156318 (-)
AMCG00005966 sbno2,LOC106573581 other downstream 221921 13036424 ~ 13051719 (-)
AMCG00005936 march2 other downstream 302234 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other downstream 323673 12920123 ~ 12949967 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other downstream 418837 12843765 ~ 12854803 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other upstream 293774 13568467 ~ 13583351 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other upstream 389371 13664064 ~ 13698534 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other upstream 884438 14159131 ~ 14171607 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other upstream 1062198 14336891 ~ 14341603 (-)
G155770 LOC103376870 other upstream 1234540 14509233 ~ 14509614 (-)

Expression


Co-expression Network