G155637 (eps15l1,LOC107592720)


Basic Information

Item Value
gene id G155637
gene name eps15l1,LOC107592720
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14097804 ~ 14098696 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196052
AACAGCTgctgcttaaaaatatataataaaaaaattatatatatatttcacacaccCTATTGTGCAGAAGTCTTCGAACAAATTAAGTTTAAGACTTCTGCACAGCACTGTGTATGAAAGCATTAcggaaatgtaaatgtttaaagcaatttgttttccccctttttgaaataaaaggaaatcaaacagggatatcattaattaatatacgcAAATACACTGCTCTGCAAAAGTCTTTGGGGAAATAAAGTCTCTTTTAATGTAACTATATTTTGAGAGAATGCAGGACCACCCAAATTAAGCTGGGGTCTCACTGACTGAGACATGAGTTATGACATCACATCCCAAGTCAAAAAAGCTGACTCTTGCCATTGGGCCCACCGGACCAAAGCCGTTTGGATTGGTGACCAGGTTTGATGTGGGGAGGATTGAGAAGAATGGGTTCTTCACTAACAGCAATGTCTCTAGCATGAAGGTGGCCACAATGAGGCGCAGCAAAGAGGTACAGAAGCTGGTGGTGCATTCTGCTATAGGTCCTTCAGTCAAAGTCATGATCACTATAAGCAGAAAGCAGAAGGGTGGACTGGACAGAGAGAGTATCACTGAACTCAACTTACAGAGCTGAAGTCTGCAAAACCCAAGGAAGAGTCTTTAGAAGCTTTACTTGAGGAGGAAGGAGCAAAAGGATCTTTGCCGCTAAACGGGTCTCCCAACCCCTTTTTACTTTGAAACGGGTCGCTGGCGTCAGCGCCAAACGGCTGGAAAGGATCGCTCAGCTTGGACGAGTCCCCAGACCCAGGCAGGTTTACTGGAGTACTCTTACCTAAAAGGTTTAGAGAGAAGAAAGATTATTTCCCCAAAAAGAGATGCCCTTCGACAGCCCGTGGGAGCAC

Function

symbol description
eps15l1 Enables cadherin binding activity. Predicted to be involved in endocytosis and endosomal transport. Located in membrane.

NR:

description
hemicentin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196052 True 893 TUCP 0.43 1 14097804 14098696

Neighbor

gene id symbol gene type direction distance location
AMCG00005962 NA coding upstream 15617 14080451 ~ 14082187 (+)
AMCG00005980 ap1m1,LOC103354064,LOC107696211 coding upstream 149340 13936793 ~ 13948464 (+)
AMCG00005981 fam32a,fa32a coding upstream 162063 13932981 ~ 13935741 (+)
AMCG00005979 rax2,LOC106613680,LOC108430232,LOC106573820 coding upstream 191102 13901234 ~ 13906702 (+)
AMCG00006002 NA coding upstream 213996 13880945 ~ 13883808 (+)
AMCG00005993 NA coding downstream 82165 14180861 ~ 14186582 (+)
AMCG00005995 NA coding downstream 100178 14198874 ~ 14210965 (+)
AMCG00005994 NA coding downstream 120583 14219279 ~ 14249791 (+)
AMCG00006010 tpm4b,LOC107596277,LOC105022485 coding downstream 202100 14300796 ~ 14305776 (+)
AMCG00006011 tpm4,LOC106573547 coding downstream 210395 14309091 ~ 14325447 (+)
G155636 NA non-coding upstream 1659 14095023 ~ 14096145 (+)
G155635 NA non-coding upstream 4930 14089336 ~ 14092874 (+)
G155566 LOC106511986,LOC103138501,LOC103464095,LOC101469484,LOC102302661 non-coding upstream 273024 13822809 ~ 13824780 (+)
G155538 NA non-coding upstream 350075 13746360 ~ 13747729 (+)
G155530 NA non-coding upstream 374899 13722700 ~ 13722905 (+)
G155639 NA non-coding downstream 23431 14122127 ~ 14122773 (+)
G155640 NA non-coding downstream 24302 14122998 ~ 14123347 (+)
G155641 eps15l1 non-coding downstream 25912 14124608 ~ 14124884 (+)
G155634 NA non-coding downstream 73468 14172164 ~ 14184809 (+)
G155728 NA non-coding downstream 390584 14489280 ~ 14491876 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other upstream 1064396 13025764 ~ 13033408 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other upstream 1202352 12894120 ~ 12895452 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other upstream 1383233 12711778 ~ 12714571 (+)
AMCG00005987 NA other upstream 1388261 12691816 ~ 12709543 (+)
AMCG00005895 NA other upstream 2191717 11903352 ~ 11906087 (+)
G155638 NA other downstream 9477 14108173 ~ 14109870 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other downstream 277299 14375995 ~ 14383580 (+)
AMCG00006022 NA other downstream 321686 14420382 ~ 14424746 (+)
AMCG00006034 vmac,LOC106573562 other downstream 553503 14652199 ~ 14659497 (+)
AMCG00006092 rps28 other downstream 1004760 15103456 ~ 15105567 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021029 eps15l1a coding NC_007133.7 CM002906.2 15912253 ~ 15957079 (-)