G155773 (LOC106568166,LOC108280735,LOC103375566)


Basic Information

Item Value
gene id G155773
gene name LOC106568166,LOC108280735,LOC103375566
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14547659 ~ 14548153 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196225
ccaaaaaaagtTAACACCCCTTGCAGAATCACACACGGCTTCGTCTTTGAACCGCCTGACAGCCGAGCTGACATTTCCTGCACAACACCACGGCAAGAcccaaacaaatgtgtttagaCCTGTAGAAAACACCTGAGGACTCATCTTCTCACACATCTGTCAGCGTGTGAGACTGACATCTGGGAACTGGCATAGCTAGGggaattaaataacattttgtggAAAATGACATTCCTGAAGAACTGACATGAAAGAGCCGACCCATCCCCACCCACTGTTTCATACCTTGCCGTCTTTTTCATATGGGGAATCAAATCTGTCGAGGAACGATCGGAATACTTGCTCTTCGGTCCACTCCCCATTCTTGTACTTGGGATGGTGTTTGGCATTGTACACGTTCTGGAGGTCTTCTATGGTCACAACCCCGTCTCCGGTTTTGTCCAGTTTCCGAAATGCGTCGGTAATCACCTGCTTCCTTACGTTGGACATAGGAGG

Function

NR:

description
PREDICTED: calcyphosin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196225 True 495 lncRNA 0.48 1 14547659 14548153

Neighbor

gene id symbol gene type direction distance location
AMCG00006016 NA coding upstream 5774 14523381 ~ 14541885 (+)
AMCG00006017 NA coding upstream 59262 14485902 ~ 14488397 (+)
AMCG00006023 LOC107552681 coding upstream 63114 14481973 ~ 14484545 (+)
AMCG00006024 NA coding upstream 70137 14472606 ~ 14477522 (+)
AMCG00006025 NA coding upstream 80401 14466131 ~ 14467258 (+)
AMCG00006054 lonp1,LOC107744642,LOC107548847,LOC107678106,LOC107679084 coding downstream 123008 14671161 ~ 14681185 (+)
AMCG00006056 NA coding downstream 137947 14686100 ~ 14694588 (+)
AMCG00006053 NA coding downstream 152638 14700791 ~ 14707124 (+)
AMCG00006055 ano8,LOC103359425 coding downstream 194044 14742197 ~ 14756210 (+)
AMCG00006042 NA coding downstream 248459 14796612 ~ 14798855 (+)
G155772 NA non-coding upstream 59 14547370 ~ 14547600 (+)
G155744 NA non-coding upstream 53577 14493726 ~ 14494082 (+)
G155728 NA non-coding upstream 55783 14489280 ~ 14491876 (+)
G155634 NA non-coding upstream 362850 14172164 ~ 14184809 (+)
G155641 eps15l1 non-coding upstream 422775 14124608 ~ 14124884 (+)
G155774 NA non-coding downstream 443 14548596 ~ 14549068 (+)
G155790 rpl36,LOC107678109,LOC107741803,LOC107744644 non-coding downstream 80289 14628442 ~ 14683002 (+)
G155832 NA non-coding downstream 212244 14760397 ~ 14761728 (+)
G155856 NA non-coding downstream 317761 14865914 ~ 14866479 (+)
G155897 NA non-coding downstream 431152 14979305 ~ 14980490 (+)
AMCG00006022 NA other upstream 122913 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 164079 14375995 ~ 14383580 (+)
G155638 NA other upstream 437789 14108173 ~ 14109870 (+)
G155637 eps15l1,LOC107592720 other upstream 448963 14097804 ~ 14098696 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other upstream 1514251 13025764 ~ 13033408 (+)
AMCG00006034 vmac,LOC106573562 other downstream 104046 14652199 ~ 14659497 (+)
AMCG00006092 rps28 other downstream 555303 15103456 ~ 15105567 (+)
G155932 NA other downstream 559056 15107209 ~ 15107734 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 1029931 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 1416280 15964433 ~ 15988775 (+)

Expression


Co-expression Network