AMCG00007046


Basic Information

Item Value
gene id AMCG00007046
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 1637115 ~ 1653312 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007046
ATGGAGGAGTGTGTCGAGGTGAGGCATGGCGCTGGGACGTGCACCTGGGAGAGCGTGAGCGCCTGCTCAGTGGCAACCGTCTCCTTGGGGAACGGAGGCGGAGGGGGTGTGGCAGACCTCTCTCTAGCTCGGGAGCCCCTTGGGCTAGAGGGTGAAGAGGCGGAAGAGGGACTTCTTCTCGGTGTATTAAGGATGACACAGTTGTGGTGTATTCAAGCAGCAGAACAATGTACAGATTTGGATTGTAAGCTTTCTCCTTCATTGGACAGTTTCCTGAGTATAATAACTTCCTATTTGCTCAAACCCTCACATGCAGGGGTGTTTAACTGGACCCTTGTCTGTTTAAAGGTGTACATCAGCTGTACAGTCATCTTATGCCAAGCTGGCAATCCCTTCACAAGGTGTGCCCAGGGCTGCAGCACTGGCATCACTGCAAGGCATCACCATCACAGGAGACAAGTGTCTGCAGAGACCGGGAGACACTCCATATCTCAGTGGCCTCTGCATCTAGCCAGGAGCTTGGGCAGTGCAGCGACCATGCCTCTATCTGCACTGCTGCTGTTCTGCCTGAGTCTGGGCTCTGGATCGTTCGCTTCACACTTGCAAGGTGGGATCATGACCTTCACACCCAAGGGAAGAAACCCAGATGGATCTTTCAGGGTGGACTTCCGCTACAAGGAGTCCTTCAGAAATGGCTGCCATCAGGAGTTTTATTGGCCGTGTGGTCTTGGCGACTGTGGGAGAAAGGTTCATTTTGAATACAACAAAATAGACGAAGATCCCTTAGGAAACGGCTGGTGTCAAGCAGAGGGATTCATGACCAGAAACATTCCAAGTGACCAACCCTTTGAGCTACGAGAATTTAGCTGCTGCTGGATTTATGATTCAGTAGACACTGCTCCTTGGCAACTTTTGACTCATGTAGATCTGGGAACAAGATCAGATACCAGTCAACCTAACAGATCTCCAGTGACAACAATCACCCCTATTAtcagGATACCTCAAAACTGCCCAGTATCCTACAGATTATTAGCCCATGATCCAGATGGAGATAGTGTCAGATGTAGGTATGGACTGAGGGAAAATGCAGAATGTCATTCCTGCAGTAGGCATCCAGATCTCTACCTTGATGAGaACACATGCACCTTGTCatatacatattcatcaaaGAGAATACACCGGTTTGAGATCATAATGCAGGATTTCCCAAGACAATACATCAGATTATCTTACGAAGACGGGACATCATCTGCCAGATCACCCTTGCCGCAACATAGACAGGGTCACAACCCCACACATTATAGCACTATGTCTACACCTCCTGCAACCCAACCTTCTTCTCCTGCAACTTCTACAAACAACTGGTGGTGGTGGAGCAGTCCAGCTATGCCCTCTAACCCACCTACAACTACCCCCAGCTGGTTCTGGTGGAACTCTTCTCCTATCACAACTGCCCCACTTACGACCACCACACCTTACCCAAACACATCTACtagctggtggtggtggtggcagcaaACATCTGCCCCAAATACAACCTCCACAGCTGCCCCCACAAACACCACAGGCATGGTGGGAACACAGTACACAGCCTCTACTGCTTCACCAACTATTAGAGACAGGGATGGGTCTCCTTTGAGCAAAATTCCCTTACAATTTGTTGTTCAAGTTGACGATCCTGTGCCTGACTGTACATTTGGACAATACAGACCTGAGTTTCTGTCTCCAACTCCAGACAATGGTGACTTACTAAGTGTCTCAGTTGGCCAAGAATTTCAATTCACTGTCAGAGCACAAGCTGTCCAATCAATGGTTTACGACATCAAGATCAGCGGGCCTCTTAATATCACAAAGTCGTTTATTTACATTAGCTACAGTCAGGAGGGCCAAGCAGTTTTCAGTTGGACCCCAACTGAAAATGACCTGAATGAACATGTTCCTTTTTGCTTTGTCGCAGAGACCACTGACGGATATCAGTCAGAACTGAGATGCGTTGTTGCAGTTGTGGGAAGAAATCATTATGGCGGTGAAGCTGATGTTGAATGCACTGAGAACACAATGACTGTTTCCGTGCTCAAGTCCTCCATGAAAGGACTTCATGAGAATTATTTGCGCCTTATTGACCCATCTTGTACATTGACATCTAACAGCACTCACGTGATTGCGGCTGTGTCGCTGAACGCTTGTGGGACACAACTTGTTGAAACTGAAGATAACCTTATATTTAGGAATGAAATCATATCATTTGATCACCCTGGGCAAGAAGTCATAACCAGGAAGCATCTACATCTAGTGGAGATTGGATTCTCCTGCTCCTACCCCAAGAAGGGCAATGTGTCTCTCGAATTCGTGGCACACAGACTCCCCTATGTGTTCACTGAGTCTGGCTTCGGCAAGTTCACCTATCAGTTTGAGTTCTTCAGCACTGATCGGTACACCAGAATGATTGACCCCAGCGCCTACCCAGTGACAGTGGAACTACGAGACATGCTCTACATAGACATTGAGGCAACATCTTCTATTCCCAACACCCAGCTGTTTGTAGAGTCCTGCAGAGCAACCCCACACGATGACCCCAGTGACCCTTTGTTCTATGACATCATTAGAAATGGGTGTGTTGAGGATGACACGGTCGTGGTCTATCCAAGCAGCCAGACACAGTACAGATTTGGAATGGAAGCCTTCGCCTTCATTGGCCAGTTTTCAGAGGTGTACATCAGCTGTACAGTCATCTTATGCCAAGCTGGCAATCCCTTCACAAGGTGTGCCCAGGGCTGCAGCACTGGTGTCACTGCAGGGCATCACCGTCACAGGAGACAACTGTCTGCAGAGACCGGGAGACACTTCATATCTCAAGGACCTCTGCGTCTAGCCAGGAGCTCGGGCAGTGCAGTTTCCAGTGTGAATCTGAACCTGAACGTCGTGTTCATCGCAGGAACATTCCTGGTGGCCGTCGCCCTGGTGTGTGGAGTGCTGATCTACAGGAATAAGGCGACCAAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007046 True 3003 mRNA 0.49 17 1637115 1653312

Neighbor

gene id symbol gene type direction distance location
AMCG00007044 usp47 coding downstream 10456 1599935 ~ 1626659 (-)
AMCG00007045 NA coding downstream 66771 1532459 ~ 1570344 (-)
AMCG00007043 NA coding downstream 118706 1504301 ~ 1518409 (-)
AMCG00007040 parva,LOC108271331,LOC106587194 coding downstream 137101 1477252 ~ 1500014 (-)
AMCG00007039 LOC108441494,LOC103379680 coding downstream 201808 1432423 ~ 1435307 (-)
AMCG00007047 NA coding upstream 6192 1659504 ~ 1697833 (-)
AMCG00007051 NA coding upstream 102278 1755590 ~ 1756342 (-)
AMCG00007054 NA coding upstream 106182 1759494 ~ 1794639 (-)
AMCG00007053 NA coding upstream 168639 1821951 ~ 1824537 (-)
AMCG00007052 syt9,LOC106573278,LOC106561481 coding upstream 191343 1844655 ~ 1862173 (-)
G20726 NA non-coding downstream 256005 1378456 ~ 1381110 (-)
G20676 NA non-coding downstream 645116 990555 ~ 991999 (-)
G20614 NA non-coding downstream 700613 906596 ~ 936502 (-)
G20617 NA non-coding downstream 717008 914130 ~ 920107 (-)
G20612 NA non-coding downstream 733380 902919 ~ 903735 (-)
G20795 NA non-coding upstream 22992 1676304 ~ 1730479 (-)
G20802 NA non-coding upstream 69244 1722556 ~ 1727167 (-)
G20870 NA non-coding upstream 518592 2171904 ~ 2172483 (-)
G20908 NA non-coding upstream 546741 2200053 ~ 2308118 (-)
G20914 NA non-coding upstream 633512 2286824 ~ 2288618 (-)
G20630 NA other downstream 684053 952236 ~ 953062 (-)
G20609 NA other downstream 719286 845929 ~ 917829 (-)
AMCG00007001 NA other downstream 1222989 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 1274821 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 1376879 259583 ~ 260236 (-)
AMCG00007059 NA other upstream 489363 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 991593 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 1822756 3476068 ~ 3500670 (-)
G21426 NA other upstream 3388347 5041659 ~ 5049520 (-)
G21429 NA other upstream 3403475 5056787 ~ 5057406 (-)

Expression


Co-expression Network