AMCG00007151


Basic Information

Item Value
gene id AMCG00007151
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5496948 ~ 5501797 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007151
atggctgatcggtgtatatattagATAGATGCACAATATGTGGTAATAtctaacaataaaacacattattttgttacagaCCCCAAACACCTGTACATATCTGTGAAAACATTTAAGTTGTATGTCCGCTTAATGCCCAGGCTGACCCTAGAAGAGGACAAGATGAATGTATGTCCATCGGAGTTGAGTTGCAGCTCTACTCATGTAACCTGTTCAGTTGTAGATGATGCAGGCTGTGGAGAGGAGGCTGTGGGGAAAAGCACGGCTCACAGCTGCCTGCAGCCCATCAGCGATTCGGACCCTGGACCCCAGTCCCCCTGCAGGCTCCTGCACAGCCTGCCCCTTGGCCTGGCGGTGGGACCATCCCTGGTGCAAGACAGGCACATGGGGATCTGGTGTGTGGGTCAGGCCTTGCAAAAGGGAACCATCTTCAGACCCCTGGAGAAGCAGGCCAGGAGCAACGACGACCAAGTGAGCAAAGAGGGAGTTGGGCAGAAGGCCGAGGGGGCTGTGGCCAGCGTGCCTCTAGAGGAGGCGGGTCACTGGATGAGGTTCACCTGTGAAGCCAGAAATGCAGAGGAGCAGAACGTGCGTGTGGTCCGGGCCCGGGGGGGGGAGCTGTGCCTCAATGTGCTCAAGGACATCAGGCCGGGAATGGAGCTCCTCCTTCACCGGGAAGAGCAGCGAGAGGAGGCAGCCGAGGGAGACGACAGACAGCGCGGCATGCAGGCGGTGGCCGTGCCAGGGCAGGACATGTGCCGTGAAGAGGGCCCAGCTGCTCTAGAAGGAAATGGCAAAGAGGGTTTTTCAGAAGCACAAGAATCGAATGCAGGTCCCCCAGAGACCCTTGCAGCCCCCGACCCATTCAAGCAGGAGTCTCGGGTGGCAGCAGCAGACATAAAACGGCCCCAGCGACTTCAGCGCAAAAGAAGGAAATCTCAAATCCCTACAGACAGCAGGAGAGACCTGAGCGATGGGGTGCGTGGCGGTGCCAGAGAAACAGACTACCGGGAGGACGTTGACAACAACTCtccacaaacaaacagcaacgcAAAGGGTTCGTCTGATGGACCTTCGATAGGGACAGGGGACGAGAGTCAGGATTCCCACGTGAAGAGCAGAGAGGAGTGTGGCCGCAAGGAAGACGATGGCAAAGGGGAGCTTGGGGCCGGCAGCTCCAGAGTCAGCCTACGCCTGGCTGCCAAACCTCGGAAAGTGCACGCCCTTGTCAGCAGGATTCAGAAGCGTCTGCACGAGCGCAAGATGAGGGTGCTGGAGCAGCAGGGGAGGGAGAAGACCCCGTCCGGGCGGGAGAGGGAGGACGCCCCGGTGAGCGATGCCAGGAATGAGCCAGAAAAACCAGAGCAGGGCCGAGCAGCGGCGCTGGAGTCCGATCACTCGGCCCCTCTGAAGGGCAGGCCCAAGAAGGGCACCAAGAGGCCCAACAGGGGGCCAGACGCTGACCATAAGGACAGCGCCGCCCCACCCGAGGAGCAGTCCGTAGTGTACGTGCACGCCATCGAGGCTGTGGCGATGGGGACCGGCGCTGACGAGAGACAGGTGGTGATCAGTGCCGCTGCCCCGTTCCAGAACAGCGTGGCGTTCGGAGCCGAGCACGTCCTCCACGGGGCGGTGGGCTCCTCGGACGAGCTGGCCCGGACCGCGCACGGCCAGCCCGGGGGCCACATCCAGCTGAACGAGGAGATCATCGAGATCATCATCCAAGACACGCACGACTCCAAGTGCATCATCGTGGCGGAGGAGAAGTCGCACGGCAGCGTGGTGATCCTTCAGGAGGACGAGGGGCTGAGCTCGGTGGCAGAGACTGTGGAGATCGAGACGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007151 True 1845 mRNA 0.60 5 5496948 5501797

Neighbor

gene id symbol gene type direction distance location
AMCG00007153 f2,LOC107554629 coding downstream 3144 5489195 ~ 5493804 (-)
AMCG00007149 NA coding downstream 11121 5471104 ~ 5485827 (-)
AMCG00007145 LOC107722349 coding downstream 49578 5438262 ~ 5447370 (-)
AMCG00007139 creb3l1 coding downstream 177709 5308415 ~ 5319239 (-)
AMCG00007140 NA coding downstream 192817 5302051 ~ 5304131 (-)
AMCG00007152 NA coding upstream 25185 5526982 ~ 5552311 (-)
AMCG00007150 NA coding upstream 78987 5580784 ~ 5588229 (-)
AMCG00007156 rapsn coding upstream 91077 5592874 ~ 5605868 (-)
AMCG00007158 celf1,LOC106561939 coding upstream 111951 5613748 ~ 5628372 (-)
AMCG00007157 kbtbd4,LOC107738697,LOC107686314 coding upstream 172380 5674177 ~ 5677569 (-)
G21522 NA non-coding downstream 1213 5495349 ~ 5495735 (-)
G21462 NA non-coding downstream 364406 5132328 ~ 5132542 (-)
G21423 NA non-coding downstream 469222 5027202 ~ 5027726 (-)
G21419 NA non-coding downstream 533388 4963357 ~ 4963560 (-)
G21418 NA non-coding downstream 537195 4959516 ~ 4959753 (-)
G21535 NA non-coding upstream 13189 5514986 ~ 5515971 (-)
G21537 prdm11,LOC106560765 non-coding upstream 15430 5517227 ~ 5518751 (-)
G21536 NA non-coding upstream 19818 5521615 ~ 5523677 (-)
G21550 NA non-coding upstream 57797 5559594 ~ 5562208 (-)
G21582 NA non-coding upstream 219466 5721263 ~ 5721542 (-)
G21429 NA other downstream 439542 5056787 ~ 5057406 (-)
G21426 NA other downstream 447428 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 1996278 3476068 ~ 3500670 (-)
AMCG00007072 NA other downstream 2833299 2644905 ~ 2663649 (-)
AMCG00007059 NA other downstream 3300093 2142675 ~ 2196855 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 315012 5816809 ~ 5820284 (-)
AMCG00007173 madd other upstream 505843 6007640 ~ 6054064 (-)
AMCG00007201 NA other upstream 1822627 7324424 ~ 7342341 (-)
G21942 NA other upstream 1997650 7499447 ~ 7506875 (-)
G22200 NA other upstream 2891399 8393196 ~ 8396224 (-)

Expression


Co-expression Network