Gene
RNA
| Item | Value |
|---|---|
| gene id | G21582 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 5721263 ~ 5721542 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU27012 | True | 280 | lncRNA | 0.48 | 1 | 5721263 | 5721542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007162 | NA | coding | downstream | 27958 | 5692142 ~ 5693305 (-) |
| AMCG00007157 | kbtbd4,LOC107738697,LOC107686314 | coding | downstream | 43694 | 5674177 ~ 5677569 (-) |
| AMCG00007158 | celf1,LOC106561939 | coding | downstream | 92891 | 5613748 ~ 5628372 (-) |
| AMCG00007156 | rapsn | coding | downstream | 115395 | 5592874 ~ 5605868 (-) |
| AMCG00007150 | NA | coding | downstream | 133034 | 5580784 ~ 5588229 (-) |
| AMCG00007163 | NA | coding | upstream | 13132 | 5734674 ~ 5752971 (-) |
| AMCG00007167 | LOC106587439,LOC106587479,LOC104919254 | coding | upstream | 105083 | 5826625 ~ 5841867 (-) |
| AMCG00007168 | LOC103364365,LOC108229046,LOC101064922 | coding | upstream | 137309 | 5858851 ~ 5859267 (-) |
| AMCG00007170 | NA | coding | upstream | 151234 | 5872776 ~ 5896585 (-) |
| AMCG00007172 | nr1h3,LOC107553099,LOC107689968,LOC107664377 | coding | upstream | 359993 | 6081535 ~ 6088041 (-) |
| G21550 | NA | non-coding | downstream | 159055 | 5559594 ~ 5562208 (-) |
| G21536 | NA | non-coding | downstream | 197586 | 5521615 ~ 5523677 (-) |
| G21537 | prdm11,LOC106560765 | non-coding | downstream | 202512 | 5517227 ~ 5518751 (-) |
| G21535 | NA | non-coding | downstream | 205292 | 5514986 ~ 5515971 (-) |
| G21522 | NA | non-coding | downstream | 225528 | 5495349 ~ 5495735 (-) |
| G21646 | NA | non-coding | upstream | 193530 | 5915072 ~ 5988322 (-) |
| G21722 | NA | non-coding | upstream | 619237 | 6340779 ~ 6341171 (-) |
| G21739 | NA | non-coding | upstream | 797581 | 6519123 ~ 6519736 (-) |
| G21756 | NA | non-coding | upstream | 844675 | 6566217 ~ 6569739 (-) |
| G21786 | NA | non-coding | upstream | 914041 | 6635583 ~ 6638309 (-) |
| G21429 | NA | other | downstream | 663857 | 5056787 ~ 5057406 (-) |
| G21426 | NA | other | downstream | 671743 | 5041659 ~ 5049520 (-) |
| AMCG00007091 | ckap5,LOC108269026 | other | downstream | 2220593 | 3476068 ~ 3500670 (-) |
| AMCG00007072 | NA | other | downstream | 3057614 | 2644905 ~ 2663649 (-) |
| AMCG00007059 | NA | other | downstream | 3524408 | 2142675 ~ 2196855 (-) |
| G21632 | psmc3,prs6a,LOC107758446 | other | upstream | 95267 | 5816809 ~ 5820284 (-) |
| AMCG00007173 | madd | other | upstream | 286098 | 6007640 ~ 6054064 (-) |
| AMCG00007201 | NA | other | upstream | 1602882 | 7324424 ~ 7342341 (-) |
| G21942 | NA | other | upstream | 1777905 | 7499447 ~ 7506875 (-) |
| G22200 | NA | other | upstream | 2671654 | 8393196 ~ 8396224 (-) |
