G22901


Basic Information

Item Value
gene id G22901
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13630245 ~ 13631291 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28712
cttaaccagTGACCGAGAACAAGTTTCTGGTGCTTTAGTCATAAGATTCAATTACCTTTATTACCAACTTTATTGTGCCTTTtggggcggggtggggggtatcttgttttgttttaaagtcaaACCTTACGTGTTCAATTGATCCATTTAAATTGAAGTCAACTTTCGTATCAAACAGCTCTGTGAAATCGTGACGTGCTTGCTAGCTGCGTCTCAAGAATGGTTTGCTTTCCATGTCAAAGTTGCTACAAAATGTCACCAGGCCACCGTCAACCGAGATGACTAAACATGATCATCATGCATAAGCCACACATTTGAAATCAATCGTATTTTGGAGTTTACCTGTTTTCCCAACAGCGCCTTGTCCTAACACGACTATCCTGACAGTTCTGGAGGAAGGGAGACTTCCCGATCTCCTCAGAGGTCTTGGCAAAGTGAAATTTGTGGTCATCTTAAGATCCTTGAAATGAACTTTAAATTACTCATTGCAGGAGGATCATGCATAAACTCCAAAGAGTTCTCCTCTTGTCTGAAACTGAAGTGTGTGTATGGGAAAAGTATCCCTTCTGTTTCCGAATAGCAGCCCAGAGGAACAGGACAGTAAACGCCTTTGTATCTGCCCCTCCTCTCAGTCACTCATAATTTATGCTGACGTTCGCAATTAAGTTGATAAATCCAAGGCTGTGCAAATGATGTGAGTCCCGACTGAGCTTTCTTCCTATCAACAGCTTTAGGAAAACACATACGCAATGGCACCCAAAATATGAACCACAGATTGCATAagttaggtaaaaaaaaaaatgcggACATATGGGTATTGATCAATAGGGATAATTACAACTGACTGCCCACCTAAACTGGGACAATGCGGGTGCCTTATCAATTATCAATAATAGAGGGGAAAGTCGCGAAGCAGTCATGAGGAACAAAACTCAAGCTCTGATGCAACATGCACATATTTGCTGAAGTTTGAGGGTTAGATTTTGTAATCATTcttttctgtttaaaacaatacaattttatttatcaagTTCTACCAATCTGTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description
ko04966 Collecting duct acid secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU28712 True 1047 lncRNA 0.40 1 13630245 13631291

Neighbor

gene id symbol gene type direction distance location
AMCG00007319 NA coding downstream 15800 13576675 ~ 13614445 (-)
AMCG00007320 NA coding downstream 235819 13392900 ~ 13394426 (-)
AMCG00007316 NA coding downstream 365283 13062794 ~ 13264962 (-)
AMCG00007315 lrrc4c,LOC106573348,LOC107670198 coding downstream 1310531 12317831 ~ 12319714 (-)
AMCG00007313 NA coding downstream 1323189 12263894 ~ 12307056 (-)
AMCG00007318 NA coding upstream 46690 13677981 ~ 13687064 (-)
AMCG00007323 NA coding upstream 112679 13743970 ~ 13856397 (-)
AMCG00007325 NA coding upstream 263594 13894885 ~ 13911848 (-)
AMCG00007324 NA coding upstream 308049 13939340 ~ 13940671 (-)
AMCG00007330 NA coding upstream 642769 14274060 ~ 14274434 (-)
G22819 NA non-coding downstream 636309 12993677 ~ 12993936 (-)
G22794 NA non-coding downstream 1536769 12081746 ~ 12093476 (-)
G22785 NA non-coding downstream 1722751 11907274 ~ 11907494 (-)
G22779 NA non-coding downstream 1738604 11891388 ~ 11891641 (-)
G22778 NA non-coding downstream 1739258 11890669 ~ 11890987 (-)
G22902 NA non-coding upstream 15240 13646531 ~ 13649777 (-)
G22941 NA non-coding upstream 429479 14060770 ~ 14061129 (-)
G22942 NA non-coding upstream 430443 14061734 ~ 14062135 (-)
G22943 NA non-coding upstream 432204 14063495 ~ 14065298 (-)
G22971 NA non-coding upstream 553411 14184702 ~ 14189688 (-)
G22838 NA other downstream 278172 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 3357550 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 3383499 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 3440041 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 3629080 9960062 ~ 10001165 (-)
G22931 LOC100846954 other upstream 314352 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 350083 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 2606170 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 2689706 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 2838176 16469467 ~ 16621905 (-)

Expression


Co-expression Network