G52834


Basic Information

Item Value
gene id G52834
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15957667 ~ 15963617 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66151
CAATCACATAACCCAGTACAGTCCTTTccaccctcccctctctctctctctctctctctctctctctctctctctgtcacacacacacacaggtgtcaGTATCTAAGCTGCACAGTTTTGGTAAGAGGGGTCTATCAGTGCGCAGAGATCCCAACTGCCCAGTCATCATCAGGGGCTGGCTCTACAAACAGgATAGCTCTGGGCTGAAGCTCTGGAAGAGACGTTGGTTTGTCCTCTCTGACTACTGTCTCTTCTACTACagagACAGTAGAGAGGAGACAGTGCTGGGCAGTATCCCATTGCCTGGTTACAGTGTTTTGATCTGCAGCACCAATGATAGCAGGAACAAGAAGCACGTCTTCAAGgcagtgcatgctgggatgCGATCTTATGTGCTGAGTGCTGACACACAGGAGGATCTGCTGGGCTGGGTCAGGGCCATGAGACAATGCGCCCTGCTGGAGGGAGAAGGAACTGCAGCCTCACTCAACAGgcGTTGCTCCAGCTTTCAGGATTTTACTCAGCTAGGGGGCAGCGCTGATTCTCTGAACCTGCCCAAATGCACCCCCTTGTGGAATGGTTCGACCCTGTTGCCCATTCCCAGTAGTGCAGCATGGACCGAACCATCTCAGCCAACACAGGTCCAGGGGGGGATGCCAGAACTGGAACAGCCTGAGAAACCACCAAACAGGAGCAAGcgaccagagagagagaggaagaatAGGCGCTCCTCTCCTGTGAAGACCACACCTGATGCTCCCCCTGCATCCCCCAAATTCCTCAGTGCTCCTGAGGAGAGGGGTCGCAGCTACAGCCAAGACACAGATGAGCCCCTCCTGATAGAGGAGACCCCTTCCCTCCCCCCCCGCTCCTTGGTGTCACGACCCCTGACTCCAAGAGGTCAACTGGGTTCGCGACCTCACACGCCAGTGGGTCGGGTGGACGTGCGACCCCAGGGTGACTCTACCACAACCCCCACACGACCACTGACCCCCCTGAGCATGGGATTGGCACCTCCCTCTCCCCAGCACCTGTCAGGGTCATCCAGGGGTCATCCAGAGGTCAGCCCGGCTTCCCTGACCCCCAGCATGGACCGAAGACACCCCCCCCATCGAGTGTGGTATCAGGGGGGGGTCTCCGGGCTCCTGCCTCCCTTGCCCCCCTCACGCTCGGCCCCCACATCCCGTGGCaatctgcctgtctgtctacCTGCTGCACTGGtactgtctgtctttctctatATCTGTGTCTAtctttgtctctgtctgtgtgtgtgtctgtgtgcatgtgtctctgtgtatgtctgtctctctctctggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66151 True 1320 TUCP 0.57 7 15957667 15963617

Neighbor

gene id symbol gene type direction distance location
AMCG00008968 NA coding downstream 59501 15895688 ~ 15898166 (-)
AMCG00008961 NA coding downstream 100468 15853214 ~ 15857199 (-)
AMCG00008962 NA coding downstream 127038 15827700 ~ 15830629 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding downstream 156294 15788545 ~ 15801373 (-)
AMCG00008959 NA coding downstream 272617 15667816 ~ 15685050 (-)
AMCG00008973 NA coding upstream 252921 16216538 ~ 16233132 (-)
AMCG00008974 LOC107730758,LOC105891716 coding upstream 310187 16273804 ~ 16289372 (-)
AMCG00008977 LOC106517428,LOC102198306 coding upstream 329699 16293316 ~ 16298256 (-)
AMCG00008976 LOC107551165 coding upstream 355751 16319368 ~ 16322631 (-)
AMCG00008975 NA coding upstream 372798 16336415 ~ 16338708 (-)
G52831 NA non-coding downstream 7336 15944798 ~ 15950331 (-)
G52814 NA non-coding downstream 17365 15940096 ~ 15940302 (-)
G52812 NA non-coding downstream 26533 15930575 ~ 15931134 (-)
G52809 NA non-coding downstream 47516 15908664 ~ 15910151 (-)
G52808 NA non-coding downstream 49260 15905873 ~ 15908407 (-)
G52866 NA non-coding upstream 161346 16124963 ~ 16126267 (-)
G52873 NA non-coding upstream 165664 16129281 ~ 16130351 (-)
G52915 NA non-coding upstream 245248 16208865 ~ 16215015 (-)
G52918 NA non-coding upstream 275141 16238758 ~ 16254139 (-)
G52929 NA non-coding upstream 347775 16311392 ~ 16313985 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other downstream 105857 15834040 ~ 15851810 (-)
G52782 NA other downstream 119866 15836989 ~ 15837801 (-)
AMCG00008957 NA other downstream 318537 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 452150 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 900461 15032347 ~ 15057206 (-)
AMCG00008971 NA other upstream 99937 16063554 ~ 16073935 (-)
G52951 NA other upstream 441093 16404710 ~ 16405126 (-)
G53017 NA other upstream 649607 16613224 ~ 16614461 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other upstream 860178 16823795 ~ 16913299 (-)
AMCG00009001 NA other upstream 1761102 17724719 ~ 17747043 (-)

Expression


Co-expression Network