AMCG00008959


Basic Information

Item Value
gene id AMCG00008959
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15667816 ~ 15685050 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008959
ATGGGTAGGAGGGCGCTGGACCAGAGTGAGCAGCGCTGGGGCTGGATGAGAGTGAGCAGGGCTGGGGCTCCTGGAGAAACAGCAGGAGGCAGACCAGTCTGGATCTTTCTTCCACACAGAATGGAGGGATTCTGGCCCatggagcaggaggaagatagaaagagggagagggagggagggagggagagtggtGGGGAAGGCAAAGAATGGGACAGggagaaaaggagaagaaagatggagagaggaagacagagggaggaagagagtGCAGCTCGAGAAATGGGCAGTAAGACTCCTGTCCACGAACACCTCCCCTCTCGACTCATCACACCCCAACCAGgtctgtGTATAAAGACAGTCTCCTCACAGGGCACCAAAGTCTTTGTGAACATCTGTCAATCACCCCAGatcccaccccctccacccctcaCAGAGGCGGGCCTAaaGGACACCCTGTTCCTGCAGTTCCTGATCGCTGTGTTGTTCGAGGGTCTGGAGAACAAGTACAGCCTTGATCTCAGTAGAGagtgGAGGGTGCTGAAGAACAGGAAGTGTCTGGGGTCCATTGGGCAGCAGAGTGTTCGCACCAGTAGCCGACCCTGTATCCAGGAGATAGAACCTGGGGGAGGACAGGCTGTTGCTGTGCGCTCGCCCTTCTCGCTTTCACCTGGATTGTTTCTTTCCCTTGCTCATCGACCCAGCGTCCAGCGCAGCCCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008959 True 717 mRNA 0.57 7 15667816 15685050

Neighbor

gene id symbol gene type direction distance location
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding downstream 7320 15649544 ~ 15660496 (-)
AMCG00008956 NA coding downstream 71494 15542462 ~ 15596322 (-)
AMCG00008950 NA coding downstream 139055 15514634 ~ 15528761 (-)
AMCG00008945 NA coding downstream 267695 15399579 ~ 15400121 (-)
AMCG00008944 NA coding downstream 276766 15372545 ~ 15391050 (-)
AMCG00008963 slc1a9,LOC107578863,LOC108434930,LOC107551162,LOC105012932,LOC107680867 coding upstream 103495 15788545 ~ 15801373 (-)
AMCG00008962 NA coding upstream 142650 15827700 ~ 15830629 (-)
AMCG00008961 NA coding upstream 168164 15853214 ~ 15857199 (-)
AMCG00008968 NA coding upstream 210638 15895688 ~ 15898166 (-)
AMCG00008973 NA coding upstream 531488 16216538 ~ 16233132 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding downstream 154593 15507248 ~ 15513223 (-)
G52676 NA non-coding downstream 189879 15415945 ~ 15477937 (-)
G52683 NA non-coding downstream 239165 15426916 ~ 15428651 (-)
G52666 NA non-coding downstream 383548 15280896 ~ 15284268 (-)
G52621 NA non-coding downstream 428701 15238055 ~ 15239115 (-)
G52774 NA non-coding upstream 136136 15821186 ~ 15822218 (-)
G52793 NA non-coding upstream 174473 15859523 ~ 15863705 (-)
G52794 NA non-coding upstream 180698 15865748 ~ 15865986 (-)
G52808 NA non-coding upstream 220823 15905873 ~ 15908407 (-)
G52809 NA non-coding upstream 223614 15908664 ~ 15910151 (-)
AMCG00008957 NA other downstream 28686 15603825 ~ 15639130 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other downstream 162299 15469674 ~ 15505517 (-)
AMCG00008934 NA other downstream 610610 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 801828 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 952494 14693830 ~ 14715322 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 148990 15834040 ~ 15851810 (-)
G52782 NA other upstream 151939 15836989 ~ 15837801 (-)
G52834 NA other upstream 272617 15957667 ~ 15963617 (-)
AMCG00008971 NA other upstream 378504 16063554 ~ 16073935 (-)
G52951 NA other upstream 719660 16404710 ~ 16405126 (-)

Expression


Co-expression Network