AMCG00008944


Basic Information

Item Value
gene id AMCG00008944
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15372545 ~ 15391050 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008944
cACAGGGATCTGAAGCCGGAGAATCTGCTGCTGGACGAGAGGAACAACATCCGCATCGCAGACTTTGGCATGGCGTCACTACAGGTGGGAGACAGCCTGCTGGAGACCAGCTGTGGATCCCCTCACTATGCCTGCCCTGAAGTAATCAGGGTGAGTCTCGCTCAGTCAGCGGTGCCTCCACTGGCCTCTCTTCTAGCCCCCTCAGTAGTCCCAGGatTGGCAAAGCGCTCCTGGTTTGGTAATTTCATCagcctggagaaggaggagcagaTCTTTGTGGTGATCAGAGACAAGCCTCTCTCTTCTATCAAGGCTGACATTGTGCATGCATTCCTCTCCATCCCCTCTCTCAGCCACAGTGTAGTCTCTCAAACCAGTTTCAGGGCTGAGTACAAGACCCCTGGCGGCCCCTCCGTCTTCCAGAAGCCTGTCAAGTTCCAGGTGGACATCTCCTTCtcagagggagagcgagagcgGGAACGGGaacgggagagggagagggagagggagggcaaGAGAGAGCTGGGCATCTACAGCCTTCTCAGCACTCACGACCAGCCCTCTGTGCAGGCACTGGCAGATGAGAAGAACGGCCAGCAGTCTCGTGGGGCCCACTCTCCCGGGCCACCAGGCACCCCCACTCGCCAGAATTCCCGGCGGTCCGAGGGGGGGGGTGATCTGgcggggggaggaggaggcggaggggcAGGGGGAATGGGAATGGGAATGGGAATgggaatggggggggggatgggAGGGAGTGGGTCCCTACAGCGTCGAGGTTCCAGCAAGGACAAGACCAGACTGCTTCCATCCAATGGCACGCAATCGCAACCATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008944 True 840 mRNA 0.60 7 15372545 15391050

Neighbor

gene id symbol gene type direction distance location
AMCG00008943 NA coding downstream 44400 15301842 ~ 15328145 (-)
AMCG00008942 NA coding downstream 167889 15202268 ~ 15204656 (-)
AMCG00008937 NA coding downstream 189979 15176616 ~ 15182566 (-)
AMCG00008940 NA coding downstream 220340 15136403 ~ 15152205 (-)
AMCG00008938 NA coding downstream 260250 15109783 ~ 15112295 (-)
AMCG00008945 NA coding upstream 8529 15399579 ~ 15400121 (-)
AMCG00008950 NA coding upstream 123584 15514634 ~ 15528761 (-)
AMCG00008956 NA coding upstream 151412 15542462 ~ 15596322 (-)
AMCG00008958 tnnt1,LOC107097207,LOC107689677,LOC108427325 coding upstream 258494 15649544 ~ 15660496 (-)
AMCG00008959 NA coding upstream 276766 15667816 ~ 15685050 (-)
G52666 NA non-coding downstream 88277 15280896 ~ 15284268 (-)
G52621 NA non-coding downstream 133430 15238055 ~ 15239115 (-)
G52594 NA non-coding downstream 200179 15169322 ~ 15172366 (-)
G52513 NA non-coding downstream 349417 14994916 ~ 15023128 (-)
G52518 NA non-coding downstream 366348 14994570 ~ 15006197 (-)
G52676 NA non-coding upstream 24895 15415945 ~ 15477937 (-)
G52683 NA non-coding upstream 35866 15426916 ~ 15428651 (-)
G52692 prmt1,LOC107729532,LOC107658485 non-coding upstream 116198 15507248 ~ 15513223 (-)
G52774 NA non-coding upstream 430136 15821186 ~ 15822218 (-)
G52793 NA non-coding upstream 468473 15859523 ~ 15863705 (-)
AMCG00008934 NA other downstream 315339 15032347 ~ 15057206 (-)
AMCG00008923 NA other downstream 506557 14840707 ~ 14865988 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 657223 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 1388652 13938451 ~ 13983893 (-)
G52099 NA other downstream 1685808 13685335 ~ 13686737 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 78624 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 212775 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 442990 15834040 ~ 15851810 (-)
G52782 NA other upstream 445939 15836989 ~ 15837801 (-)
G52834 NA other upstream 566617 15957667 ~ 15963617 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location