AMCG00010246


Basic Information

Item Value
gene id AMCG00010246
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21124002 ~ 21173380 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010246
GGGCTATTTCTGCTATCTGTCGCTATCGGTCTGCAGTGCTAACAGTTTGGCAGAtggaacttttttttcttttttgtactgGAGTTTGCAGCTTTGAGTTTTTAAACTCCCTGGCACTGTCTCACTTGTTATTGTGGCGTGAGTTCCTTCTGCTTTGCTCCGTTcactgagaggagagagagagagtggaacAGAATCAGGCagacaaagaaagagagagggaaagtggGAGAGAGACTCTCGGCATGGCCCACCGACTGCGACTCTACTTTGGCTCTGGGCGTAGCAACACAGCCCCTGAGATGGAAGAGTTGGAGGGGGCAGCAGAAGACGACATTGCCATGACATTCCATACACTGCCTCGCAGGAGAGGCCTGCCCCCCTTCTCTGACCCAGAGAGCTCTCTCCCCAGAGAAACGTCCCTGAAGCGCAGCTCCTCCATGTTCATCCCACAGCTTTCCAACCAGATAGATCCTCGGCCTACAAAAAGCTCCTCCATGCAGATCTCCCTGCAGCGCAGTGCCGGGAGTGGAGAAGAGGGACTGTCTCCTGATTCCCCTCCAGATTCTCTCCTGGGCCCAGCTCCAGCCTATAAGGACCCCACCAGGAAATACTCTCTGCCTGCGGACTTACCCACGAATAAGGACATCTCAATGGGGACTCCAGCATTTTGTGAAACATCTGGTGATCCGAGCTGTCATAATCGTAGGGTTTTTAGTATGATGCCTCAAGAATGCCAAAACGGGCACAGAAACCCAGAGGTGGTGAATGGGGGTCTCCCAGGTGGGATAAATATCGGAGGCTTCTGTATTCAGAGGAATTCTACAGGGAACTCAGATTTTCAGCAGTTTCGGATTCTGCCCTGCGGTCCAGAGGGCCAGAATCTCCACCGACGCTGGTCTGTGCAACAGGAATCCAATGGCTCCCCAGGCAAGCAGCGCTTTGTGGTTCAGCTGCAGCAACCCGGGATGCCCAAGATTCAACAGATGGAAGGGGCAGACCTGGGGTTCACTGGCACCAAGGGAGAACGGGTGATGAGGTACCCACGGATAAGACTTGAGAGGAGCGCTTCACACCCAGTGCAACCAAGAAGTGTGACTCCTTGCCATGGTGCCACTGGAGATGGGCAGGAGCCCCAGAACAGGAATCCGGACACTGAGGGCAACAGCAGGGATACTGATGACTCGTTGCAGGgctgcacttttaaaataagacaggagcaaaacaaaaggcagCCCCAGTTTAAGATCTTTTTCTCTCGGGGTGGAGAAGAACAAAATCAGACTTTGTCACAGGATATAAGCTCTGGAAATAGACAAGCAAGGATCAGCCCTCAGacCGAAGACCCAGCAATGGAGCGGccatatacatttaaagattttttgCTTCGGCCTCGCAGTCACAAGTCACGGGTGAAGGGATATTTGCGTTTGAAAATGGCTTACTTGCCCAAAAATGGAGGGCAGGATGATGAGAACAGTGAAACGAGAGAGGAGGCTGAGGGTTGGGAAGTGGCCGATCCTGCTGACTCGGGGTCTCAGCGACAGCAACAGCTTCCCCCCTTGCCTCCAGGGTGGGAAGAGAAGATTGATAACCTCGGCCGCACCTACTATGTCAATCACAACAACAGGACAACACAGTGGAAGCGACCTAGTACAGTggATGTTGTGTCAGAGACCGAGAATGACAACCATATCCGACAGATCAATCAAGAGGCCCATCGTGTGTTCCGATCCAGGAGACACATCAGCGAAGACCTGGAGCATGAGCAAATTGAACACCGAGACATTGATGATTCGTGGGATACAATTTCAGAGGAATCCAGTTTTGCAGCAGAACCCATGATCCAGTCTCTGCCCCTGCCTTCCTCCCCTACTGCCTCTGCCCAGTCCACTCCGCCGGAGTTCTCCGAGGAGATCGGGCGCCAACTGCAGCTCGTCCCTGATGCCAACGGAGAGCCCCCCGGCGCTGCTGTGcAGAGCCAGCCCTCCTCCAAACTGCGCTCATCCAGTATGACAGACGGAGTCAGTGACCAGGCCCAGCCCCCTCCCGCGACCTCGCAAACCAGGAGAACCCGTGCTCAAACTGTCACTGGTGTTGAAGAGCCTATGTCTCCCTCTGAGGCCTATGTCCACACCACTCCTGGCCTGCCCCCGGGATGGGAAGAGAGGAAAGACGCTAAGGGACGCACCTATTACGTCAACCATAATAACCGCACAACAACCTGGACTCGGCCTATCGTGCAGGGGGCAAACAGCGTGCAAGTTCGGCGTGCAGTGAAAGACACATTCTCCAACCCGCAATCTCCCCAGCCCTCCCCCTACAGCTCCCCCAAGACCCAACACAAAACCGCACAGAGCTTCCTCCCCCCTGGCTGGGAGATGAGGATAGCCCCCAATGGAAGGCCCTTCTTTATTGACCACAACACAAGAACCACTACCTGGGCGGATATCCCCAACAGATTTGAAATGAAGCTTCACAGAAACAACATATTTGAGGAATCATACCGTAGGATTATGTCCCTGAAGAGACCAGACATACTTAAGGCCAGACTGTGGATCGAGTTTGAGTTAGAGAAAGGCCTGGACTATGGAGGTGTGGCCAGAGAGTGGTTCTTCCTGCTGTCTAAAGAGATGTTTAATCCCTATTATGGACTCTTCGAGTACTCTGCCACAGATAACTATACGCTTCAAATCAATCCCAACTCTGGGCTCTGTAATGAAGACCATCTCTCATACTTCAAGTTCATTGGTCGAGTCGCAGGAATGGCCGTGTTCCATGGAAAGCTGTTAGATGGCTTCTTCATTAGACCCTTTTACAAGATGATGTTGGGGAAGCAGATCACACTGAAGGACATGGAGTCAGTGgacAGTGAATATTACAACTCCCTTAAATGGATTCTGGAGAATGACCCTACTGAACTAGATCTCCGGTTTTGCATTGATGAAGACAACTTTGGACAGACATATCAAGTGGATTTGAAACCGAGTGGCTCAGAAATGGTTGTGACAAACGACAACAAAAAGGAGTATATTGAcCTTGTGATCCAGTGGCGTTTTGTTAACCGGGTACAGAAGCAAATGAATGCCTTTTTGGAGggATTCACAGAACTCATTGCTATCGACTTGATTAAGATATTTGATGAAAACGAGCTGGagCTGCTGATGTGCGGTCTGGGGGATGTAGATGTCAATGACTGGAGACAGCATACGGTCTACAAAAATGGCTACTGCCCCAATCATCCTGTTATCCAGTGGTTCTGGAAGGCTGTGTTGCTGATGGATGCTGAGAAACGAATCCGGCTTCTTCAGTTCGTAACTGGAACATCACGAGTTCCAATGGACCTCAGTTGTTTACCATTGAACAGTGGGGAACACCAGAAAAACTGCCCAGGGCCCACACCTGCTTCAATCGTCTGGATTTGCCAACCTATGAATCTTTCGATGACCTTCGGGAGAAACTCCTCATGGCAGTAGAAAATGCTCAAGGATTTGAAGGCGTTGATTAAAatgagcaaaaaaacaacaacaaaacaagctgCCAATTCTCTCCAAACTAGAGCaactgtatgtgtctgtgtgtgtgtgtgtgtgtgtgtaagtgtctTCACGtttgatgtgtgtatatatatatatatatatgttaatataatatatatatataatatatatcgcaaacaaacacacacaaacacactgataaGGACTTTAGTGAAGTGACATAAGTCATTGAACAATCTCTACTCAACCTTTTCGTATTCCAAGTATCTGGGAGACTGGAGAAGTTTTGTGGAAACTCATTTGTATTGCCACCACAGCAACTTACAATGAACTTCtgatacatttcagtaaatcTTCTATTTATACTGTGCTGATGAAGGCATGGCCTTGAAATATTTTGCATTCTTTCTAACTGCAGTGAATGGAAATGATCACTTTTACAGCTCTAGCACTACACCTCTTGATTACCATAGGAATGATGTTGAAATCTCTGTCAAGGTTATCTATTGTCTTCATTGTcacaaatatttcatattttatcatACAGCAACTGCAcaggcattttgttttcactaggatatattttgtttaacttcTTTTGAATGGAAAGAAGAAGGAATTAAATGTTCATAatcagatttagatttttctataGATCACAACAGTTAATTTGTactgattaaatgttttccattttaaacaatgcacCATAGACATTAATTAGGccttttcaaatttaaattgcatatatttGATGCAATTAATAATATGGTAAAGGAATTGCTACATTAACCAGCATGGATATTTCTCATGCATTTGAAACCACtacataaattatgaaaaagacGGATTTGTCCTTTCTTAGTCAGTAtcccttaaaaatatataaatgcatttgtggGAAGGGTTTGAGtaacatttattatataaatattattagaCTTAACCCTATTCATaatgctgtaaattaatttCTTACAACATTCAGATCGCTTTAACAATATTCTTGGTATTGTGTTATGGAAGTAATgataatgaacaaaaacatgaaaatgaaactaTATGAAAGCTGTGacagtaattgtttatttatttaagctaGTAGTTGCTTATatgcaaatcatttattttatgtttgcctTGTTCTAACACCACTGAACCTAAGGGCACTTTATCAATCCCACTAAGGTCATATCgcttattatttgttttttatctttttatcatTAACTTGAATGTGATTATATTCCTTGAGTGCACTCATTTACCAGGTGCAATATCTATTGTCTGTAAATTTGGCTGCTGCTaatgtataaacacacagtTGTGGCGATGAGCCGTCAAACTGTTTTTCCTCACTTTATCTCCGGTTTCTGTGTCCTGGTTTTCAATATGGGCCCTAGTGACCTTTCCTTAAACTGTTGAaatgattattaacatttttttaaagagatattgtttgtttcttttaatgttatttaaataactcCTCAAGCctttaaaatcacaatgtatGGATTCTAAATAAGATGCATTAATAAACTACATGAACGCAGTGGTATAAACATTGCCACTTTATGGACATTTGACCATGTCAAAACTGTTTCATGTTGATATCTGAGAGCTGGCTTCCCTAGATGTTCTACTAAGGCTACGGTGTTGGAAATTAATAGAGCAGTAAGGAAAGGCAAGCTGTGCTTCACATGCCATTATGATAGATGGATGCCTTTGGGTCCGTTGGATCCTTCCAGCACAATTAGTAAGCAGGAAAAACTAGAAACCATTGAGGTTGAAGATGCTCAGAAGTAAACTGGTAAGCCTTTGCATGATTATGTTGATCTCCTCAAATGAAAACTACtaactgtattttctttcctttttactACCCTGTCACAATATGTTGTAACAAGTTCCTCATATTAAATAATAGCAGtttgcaatgtaatttactTTCTGAATGTGTTTAATCTGGGCTAGAAAGTAAGGAAAAGGTCACCTTTATCTATGCATCTATGTGTCTGTCCAAGGCAATTTACATGattttataaacatgtttaacatATTCACCATATTACAGGGGTaagaaaaaacaccatcaaCTGGCATCCACATTAGGGTATGAAATCAAATGAGGTCAGAATTTGCCAACTGGTGTCATCAAAGCAGATGTGTCTCAAGGAAGCTCAAATTTTACTAAAATCCAACTAATTCAGGCGCTGCTTGAATCTCCTCCACTCGCCAGCTCCTCTGTTGAAATCTGGATATGTTAATTTTGGAACAGAAAGCACTCCCTATAAATGTAGTCTGAACTGTTGAGTTTTGATGGGATGGTGGAAGGGGGTGACACAAGGTGCAGTTGACATGTTCATGGATAGTTGTTTCCATGTCGTTGGGGGGGCGATGACTCAGGAGAAAGGGTAGGGGCCAGGAGACAAGAATAAGGGGAAGTACAGCTTGTCACCCAGCAAAGGAGGAGTGGAAGGGCCAAAAGTAGAGAATAAGTTTGTGGGAAATTGTTGTGATCTGTGCCTGTATTCATAAAGCATCTGAGAGTGATAAATCGGTCCTAAGTGtctgaaatatctgagagtgacATCAATTTGGTCCTTAGGCTACTTAGGAGTAAAAGCTATTAATAAagattctttagaattaaaagtactCCTAACTCAACCAATATTTAGGAGAGCTCACAATGAAAGGAAAGGTGTTACAGCGGTGTCATGAGGAACAGTTTTTGCGACTATATAaattggacagaaattgaatattgttttttactgaacaagtcagaaattgcagtttcttctgccactgtcagaaatgtgtCATCATCAGCAGAGATAAAGGTGGTGATAATGTTGCGGTGTCTGGtcacagggaaaatgcaacacTAGCACTGATGATATGGGACCATCATTACAGCCTTCAATGAGCAGAATTTTCCATCAAACCATAATGGCATTAACTGCACATGAGATCttcgacagtttattgatttctcCACTACTGTGtggcaaatacccccaaaacaagccACAATTCTTAATCAATGATTATGCataatcaatgctagcctatattcatcaagggttttacaaaacaaaaaacgcaaaatgattgaaaaatgatccactcatccaaagcatattcataataaactgtatgcatgGTGaggaatgcatgttaacttgaatttgtattttattcaaaagtgtctgaaataccaaatcggtgtaaaacccttCATGAATAAACCCCAGTGTTTCCAACTGTGGACAATTTCCTGTGTACAACAGAAGGCTAAATAGTGTtaaatttaagatgttttatgtatattttatgattgtgattatgaatgtgaaattaatgttgaattttaattccatgtagcaccttAACATCCTCGTAATGAAAGAGTGAGGgggaaacacttttttttttcctttcccaaaataaagaaaatgcatcacaattaGATGTATTCTAACCTAAACTGTCGTGAAAATTTGCTAAAAGTTTGAACTACAATTGGATCCCACTTCCAGCTAAAAATAGATGTAAGAGACTTTATGACTGACTTCTACCTCCTACTCTGAGCAAGGAGTAATCTTACTCCTAAACTAACTTTTAGCGTGATTCCTAGGAgtaattctgaaatgttttatacatactGGCACAGGTCAATAATGAGTTAAATCCTGATAAGTTTTTGTAATTTGCTGGGGATTTTATTGGCAACCACCtgatattatttaattagatttgggttttttattttatttttagaagcacAGAATTTTaactaaagaaaaatatgacTCGGACATCTGTTAATCAATGTATTGGTCTGGCTTGGGTATGGAAAACTGATCTGTCTAattcctttacattttaattagaccTTATTTAGGACAGATACAAAGAAGCCAGTAAATGTACAgttcaaacaaat

Function

GO:

id name namespace
GO:0009260 ribonucleotide biosynthetic process biological_process
GO:0052652 cyclic purine nucleotide metabolic process biological_process
GO:1901293 nucleoside phosphate biosynthetic process biological_process
GO:0046068 cGMP metabolic process biological_process
GO:0006163 purine nucleotide metabolic process biological_process
GO:0006164 purine nucleotide biosynthetic process biological_process
GO:0006182 cGMP biosynthetic process biological_process
GO:0046390 ribose phosphate biosynthetic process biological_process
GO:0009150 purine ribonucleotide metabolic process biological_process
GO:0009152 purine ribonucleotide biosynthetic process biological_process
GO:0072521 purine-containing compound metabolic process biological_process
GO:0072522 purine-containing compound biosynthetic process biological_process
GO:0009165 nucleotide biosynthetic process biological_process
GO:0009187 cyclic nucleotide metabolic process biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010246 True 7455 mRNA 0.42 21 21124002 21173380

Neighbor

gene id symbol gene type direction distance location
AMCG00010248 NA coding downstream 151576 20967672 ~ 20972426 (-)
AMCG00010242 NA coding downstream 343033 20770284 ~ 20780969 (-)
AMCG00010240 hcn1,LOC107374708,LOC107085810,LOC102226223,LOC103473886 coding downstream 521629 20591736 ~ 20602373 (-)
AMCG00010239 hcn1,LOC106568517,LOC108278484 coding downstream 597083 20505376 ~ 20526919 (-)
AMCG00010241 NA coding downstream 636862 20486176 ~ 20487140 (-)
AMCG00010265 NA coding upstream 417588 21590968 ~ 21591558 (-)
AMCG00010264 NA coding upstream 488210 21661590 ~ 21681366 (-)
AMCG00010263 NA coding upstream 583800 21757180 ~ 21772537 (-)
AMCG00010267 NA coding upstream 834034 22007414 ~ 22011792 (-)
AMCG00010270 NA coding upstream 857614 22030994 ~ 22043479 (-)
G79234 NA non-coding downstream 11790 21109587 ~ 21112212 (-)
G79179 NA non-coding downstream 71439 21050811 ~ 21052563 (-)
G79143 NA non-coding downstream 211819 20911411 ~ 20912183 (-)
G79092 NA non-coding downstream 656306 20467305 ~ 20467696 (-)
G79088 NA non-coding downstream 707000 20416790 ~ 20417002 (-)
G79257 NA non-coding upstream 313327 21486707 ~ 21487020 (-)
G79297 NA non-coding upstream 463064 21636444 ~ 21637006 (-)
G79298 NA non-coding upstream 464299 21637679 ~ 21637897 (-)
G79299 NA non-coding upstream 465616 21638996 ~ 21640109 (-)
G79301 NA non-coding upstream 469950 21643330 ~ 21643533 (-)
AMCG00010247 NA other downstream 42177 21053624 ~ 21081825 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other downstream 182609 20931171 ~ 20941393 (-)
AMCG00010234 hint2,LOC106585387,LOC107720264,LOC103469931 other downstream 928618 20188658 ~ 20195384 (-)
AMCG00010206 NA other downstream 2251920 18863268 ~ 18872082 (-)
G78610 NA other downstream 3178241 17945235 ~ 17945761 (-)
AMCG00010262 shc3 other upstream 367639 21541019 ~ 21572512 (-)
AMCG00010271 NA other upstream 791149 21964529 ~ 21982050 (-)
AMCG00010288 NA other upstream 1909275 23082655 ~ 23086345 (-)
G79601 NA other upstream 2186263 23359643 ~ 23364947 (-)
AMCG00010343 hook3 other upstream 4342684 25516064 ~ 25556080 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location