Gene
RNA
| Item | Value |
|---|---|
| gene id | G79298 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 21637679 ~ 21637897 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU98891 | True | 219 | lncRNA | 0.48 | 1 | 21637679 | 21637897 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010265 | NA | coding | downstream | 46121 | 21590968 ~ 21591558 (-) |
| AMCG00010246 | NA | coding | downstream | 464299 | 21124002 ~ 21173380 (-) |
| AMCG00010248 | NA | coding | downstream | 665253 | 20967672 ~ 20972426 (-) |
| AMCG00010242 | NA | coding | downstream | 856710 | 20770284 ~ 20780969 (-) |
| AMCG00010240 | hcn1,LOC107374708,LOC107085810,LOC102226223,LOC103473886 | coding | downstream | 1035306 | 20591736 ~ 20602373 (-) |
| AMCG00010264 | NA | coding | upstream | 23693 | 21661590 ~ 21681366 (-) |
| AMCG00010263 | NA | coding | upstream | 119283 | 21757180 ~ 21772537 (-) |
| AMCG00010267 | NA | coding | upstream | 369517 | 22007414 ~ 22011792 (-) |
| AMCG00010270 | NA | coding | upstream | 393097 | 22030994 ~ 22043479 (-) |
| AMCG00010269 | NA | coding | upstream | 412100 | 22049997 ~ 22064355 (-) |
| G79297 | NA | non-coding | downstream | 673 | 21636444 ~ 21637006 (-) |
| G79257 | NA | non-coding | downstream | 150659 | 21486707 ~ 21487020 (-) |
| G79234 | NA | non-coding | downstream | 525467 | 21109587 ~ 21112212 (-) |
| G79179 | NA | non-coding | downstream | 585116 | 21050811 ~ 21052563 (-) |
| G79143 | NA | non-coding | downstream | 725496 | 20911411 ~ 20912183 (-) |
| G79299 | NA | non-coding | upstream | 1099 | 21638996 ~ 21640109 (-) |
| G79301 | NA | non-coding | upstream | 5433 | 21643330 ~ 21643533 (-) |
| G79302 | NA | non-coding | upstream | 7248 | 21645145 ~ 21645584 (-) |
| G79304 | NA | non-coding | upstream | 9528 | 21647425 ~ 21647711 (-) |
| G79305 | NA | non-coding | upstream | 10023 | 21647920 ~ 21648337 (-) |
| AMCG00010262 | shc3 | other | downstream | 65167 | 21541019 ~ 21572512 (-) |
| AMCG00010247 | NA | other | downstream | 555854 | 21053624 ~ 21081825 (-) |
| G79147 | cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 | other | downstream | 696286 | 20931171 ~ 20941393 (-) |
| AMCG00010234 | hint2,LOC106585387,LOC107720264,LOC103469931 | other | downstream | 1442295 | 20188658 ~ 20195384 (-) |
| AMCG00010206 | NA | other | downstream | 2765597 | 18863268 ~ 18872082 (-) |
| AMCG00010271 | NA | other | upstream | 326632 | 21964529 ~ 21982050 (-) |
| AMCG00010288 | NA | other | upstream | 1444758 | 23082655 ~ 23086345 (-) |
| G79601 | NA | other | upstream | 1721746 | 23359643 ~ 23364947 (-) |
| AMCG00010343 | hook3 | other | upstream | 3878167 | 25516064 ~ 25556080 (-) |
| AMCG00010364 | inip,LOC107658659,LOC107558675,LOC107571239 | other | upstream | 4730035 | 26367932 ~ 26379747 (-) |
