Gene
RNA
| Item | Value |
|---|---|
| gene id | G79299 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 21638996 ~ 21640109 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU98892 | True | 275 | lncRNA | 0.49 | 2 | 21638996 | 21640109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010265 | NA | coding | downstream | 47438 | 21590968 ~ 21591558 (-) |
| AMCG00010246 | NA | coding | downstream | 465616 | 21124002 ~ 21173380 (-) |
| AMCG00010248 | NA | coding | downstream | 666570 | 20967672 ~ 20972426 (-) |
| AMCG00010242 | NA | coding | downstream | 858027 | 20770284 ~ 20780969 (-) |
| AMCG00010240 | hcn1,LOC107374708,LOC107085810,LOC102226223,LOC103473886 | coding | downstream | 1036623 | 20591736 ~ 20602373 (-) |
| AMCG00010264 | NA | coding | upstream | 21481 | 21661590 ~ 21681366 (-) |
| AMCG00010263 | NA | coding | upstream | 117071 | 21757180 ~ 21772537 (-) |
| AMCG00010267 | NA | coding | upstream | 367305 | 22007414 ~ 22011792 (-) |
| AMCG00010270 | NA | coding | upstream | 390885 | 22030994 ~ 22043479 (-) |
| AMCG00010269 | NA | coding | upstream | 409888 | 22049997 ~ 22064355 (-) |
| G79298 | NA | non-coding | downstream | 1099 | 21637679 ~ 21637897 (-) |
| G79297 | NA | non-coding | downstream | 1990 | 21636444 ~ 21637006 (-) |
| G79257 | NA | non-coding | downstream | 151976 | 21486707 ~ 21487020 (-) |
| G79234 | NA | non-coding | downstream | 526784 | 21109587 ~ 21112212 (-) |
| G79179 | NA | non-coding | downstream | 586433 | 21050811 ~ 21052563 (-) |
| G79301 | NA | non-coding | upstream | 3221 | 21643330 ~ 21643533 (-) |
| G79302 | NA | non-coding | upstream | 5036 | 21645145 ~ 21645584 (-) |
| G79304 | NA | non-coding | upstream | 7316 | 21647425 ~ 21647711 (-) |
| G79305 | NA | non-coding | upstream | 7811 | 21647920 ~ 21648337 (-) |
| G79306 | secisbp2 | non-coding | upstream | 9019 | 21649128 ~ 21656048 (-) |
| AMCG00010262 | shc3 | other | downstream | 66484 | 21541019 ~ 21572512 (-) |
| AMCG00010247 | NA | other | downstream | 557171 | 21053624 ~ 21081825 (-) |
| G79147 | cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 | other | downstream | 697603 | 20931171 ~ 20941393 (-) |
| AMCG00010234 | hint2,LOC106585387,LOC107720264,LOC103469931 | other | downstream | 1443612 | 20188658 ~ 20195384 (-) |
| AMCG00010206 | NA | other | downstream | 2766914 | 18863268 ~ 18872082 (-) |
| AMCG00010271 | NA | other | upstream | 324420 | 21964529 ~ 21982050 (-) |
| AMCG00010288 | NA | other | upstream | 1442546 | 23082655 ~ 23086345 (-) |
| G79601 | NA | other | upstream | 1719534 | 23359643 ~ 23364947 (-) |
| AMCG00010343 | hook3 | other | upstream | 3875955 | 25516064 ~ 25556080 (-) |
| AMCG00010364 | inip,LOC107658659,LOC107558675,LOC107571239 | other | upstream | 4727823 | 26367932 ~ 26379747 (-) |
