AMCG00010349


Basic Information

Item Value
gene id AMCG00010349
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 25914914 ~ 25940115 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010349
CCAACTCTCGCGATACAGGCCTTCTGGTTGCTGGGCTGCAGAGACAGAGGCGGATATGTAAACAGTCGCAAAACCTTTAAAGACAAGATCTCAGTAGGTGTTGAAGTGAAAGATGGCAAGTCAGAGGCCTCCCTCGGGTCGACCGATGAGCAGAGGTGGTCTGTTACCGGCGGGGGGAAGACCACCCACTGCAATCAGACCACCAGCAACAGCCATCCGAGTCGGAACAGGGATCCCCCCTGGAACTGGCCGTCCGGGAACACGAGGAGGACCGATGGCCACTCCAGGAGTCCTCTCTGCGCAGATTAAAGTGGCTGATCGGCCAGTCACCCAGCAAGGCCTCAGTGGCATGAAGACTGGCATGAAAGgaCCACAGAGGCAAATTCTGGACAAATCATATTATCTTGGAGTTCTCAGAGGCAAAGTCAATGAACTTACAACTGAAATCAGCAAATTGCAAAAAGAAATTGACACTTTCAACCAAGAGAATTCCGTCTACCTGTCCTATGAAAAGAGAGCTGAAGTTCTTGCGTCTGAAATTAAGGACATGCAAGGGCAACTGGCAGATTACAACATGCTTGTGGACAAACTGAACACCAATACTGAGATGGAGGAAGTGATGAATGACTTTAACATGctaCGAGGACAAAATGATCGAGAAGCTCAAAGTATTGATGTCATTTTCACAGAAAGACGAGAAAAAGAAGAGATGGTACGTGCAGTAGAGGAAGAAATTGAACGAGAGAAGCAAGCAGCTGacaacatcattaaaaaaatgtctccAGAGAAACAAGCCAAGTATATGGAGATGAAAACTAGCAATGATGAACGTCTGCAGAAGCTGGATGCCCTTCAGCAGGAATTTGATGCACTGATCACAAGGAAGGAGACTTTGGAGGCTGAGATCGCCCACTCTCAGGTGAAGCAGGAGGCAGTCTCGCTGCATGAGAAGCTGCACGAGCTGGAGCTGCACAGAGACACGATGGTTGCCGAAGACAAGAGTCTGGGCTCTCCTCAGGAAGAGAGGGAGCGGCTGCTGAGGCAGGTTAAAGAAGACAACCAAGAAATAGCAAGCATGGAAAGAcagctAACTGAAATACGAGAAAAGATCAGTCAAGTGAACAAAGAAATGCAACAAATTGACAATGATATGGAAGAACATCAAGGGGAACGAAGCCAGAAGTACAAGGAGctgaagaaaagagaagaaaacatggACAGTTTTTTTGAGACGTTTGAAGAAACTAAAACCCAGGAGATGGAACACAAGCAACACACAGAGACCAGCATTGTTGCTCTGTTAGAGCACTCCAGCAGGAACATAAACCGTATGAAGCAGATCTCCTCTGTCACATCCAATGAACTGAAAACCATGCAGGAGGACCTCAGCTTTAAGGAGACTGAAATGCACAAATCCCAAAGCACTGCCAAAGGCTTGTCTTCAGAGAGCCATCGTTTACAGCAAGACCTTCAGAAGGTAGAGCAGCTGGAGAGCAAGATCACTGCAGAACTCCACAATCTGAAGGAGAAGATCCAGCAGATGAGTGAGGGGCTGGAGACCTACAGCAATCTTGACACACTGAAAGCAGCaggggaggaaaagaaaaagAGGCTTCAGGAAGACAGAGTGACCCTCACAAAGAGAAGAGACACCTTTAAGAAGGTTATGCAAAGACTGAATGATGAATACGAAACATTAAAAACCCAGCTACAAGAGAATGAGACTCATGCGCAGGGAATGGAAAGTGACTACCGTCCAGTGGTCAAGAATGTGACTAAACAACTGGCAGAATACAATAAGATCCTCACGGAGAGCCTTCAGAGTACCAGAAATTGA

Function

GO: NA

KEGG:

id description
K19679 IFT74; intraflagellar transport protein 74

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010349 True 1837 mRNA 0.47 19 25914914 25940115

Neighbor

gene id symbol gene type direction distance location
AMCG00010348 NA coding downstream 3743 25891998 ~ 25911171 (-)
AMCG00010342 NA coding downstream 702415 25201333 ~ 25212499 (-)
AMCG00010341 NA coding downstream 748938 25158070 ~ 25165976 (-)
AMCG00010339 dcc,LOC106593392 coding downstream 794571 25118889 ~ 25120343 (-)
AMCG00010340 dcc coding downstream 853010 25018454 ~ 25061904 (-)
AMCG00010350 NA coding upstream 141865 26081980 ~ 26118160 (-)
AMCG00010351 NA coding upstream 256926 26197041 ~ 26202850 (-)
AMCG00010352 NA coding upstream 264367 26204482 ~ 26219813 (-)
AMCG00010363 ptbp3,LOC107658670,LOC107744247 coding upstream 285172 26225287 ~ 26247508 (-)
AMCG00010370 NA coding upstream 488792 26428907 ~ 26444908 (-)
G79984 NA non-coding downstream 28424 25844343 ~ 25886490 (-)
G79963 NA non-coding downstream 190237 25724477 ~ 25724677 (-)
G79882 NA non-coding downstream 1110751 24800669 ~ 24804163 (-)
G79881 NA non-coding downstream 1155651 24723835 ~ 24759263 (-)
G79872 NA non-coding downstream 1264282 24601132 ~ 24650632 (-)
G80080 LOC108430444 non-coding upstream 78848 26018963 ~ 26021958 (-)
G80094 NA non-coding upstream 129188 26069303 ~ 26069625 (-)
G80095 NA non-coding upstream 138685 26078800 ~ 26080513 (-)
G80090 NA non-coding upstream 186941 26127056 ~ 26127305 (-)
G80100 NA non-coding upstream 188851 26128966 ~ 26129228 (-)
AMCG00010343 hook3 other downstream 358834 25516064 ~ 25556080 (-)
G79601 NA other downstream 2549967 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 2828569 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 3932864 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 4342402 21541019 ~ 21572512 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 427817 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 472095 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 4012575 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 4570855 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 5132337 31072452 ~ 31080322 (-)

Expression


Co-expression Network