G80095


Basic Information

Item Value
gene id G80095
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26078800 ~ 26080513 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU99891
CTTTTAGACACttacaaagaaatgaaagaggcatttgaacattttttattgtttctaaagagctccccctcccccccaggaatctttatattaaattaaattacattgtcCACAAACCAAATActttcaaaagcaaaagcaaagcaattatttcaaatatatagaaatacgGAAACGATACAAACTGCTTAACTGTATAAAAAGATTATCCTCACATAAAGCGGCAAAAGGCagagtgtgtgattgtgaaaCACTTCTGTAATTCAGTACAGGACTTACACAATTTTAGTGGCGATCTCCTTACAAGACCAGCACTATGTGCTTCTGCATAACATGATCAAATCTTCATCCCTAATTGACAGCTAAGATTACAGATCTACATTTAACatagtttatttgttatttttcaaaagagtgactgaagcttttgtttttacGTCTCATCCCAGGCATACCGTCTTTTTAACATCCACTTCTGGGACAGATGTCTTTTACTTTACATAGAAAATAACTAGCTAGTAATTACCATGATCATAGAATAAGTATTGTACATCCTTTTCCCCCGGAGTAATGCTTACTACAGAGCTTTAACTGACATTTTCAATACTAACTTAATGGTGATATATGCCGTCTCCACTCCTACGGATGGTGAACTCCCTGACCAGGGCTTGCATAGACTTCTAATGATAGCTGGAGCTGCTTAGAAAAATTTGAATCAACAGCAGTTTGCTCATGAAACTGCTGCCACGACATGAAATGGCACACAAACTGTGTAGGCTTTCCTCATAGTAGGTTCAAGTACCATGAGAATGGCTTTGCTCACTTCTGGGGTCCTAGATTGctagttattgttattaattatattattattatattatacattgctgttgtttgttattttgccCCTTTTTGTCTGTTGTGTTAACACATAAAACTTGTTTGCAAATAGTCTATATTCCTTTaacttttttgtaaaaaaattataaaatacagctATATAGGTTTATTTATTCCATCTTATTACAAAAATGACTCACTATATTACACGTATCCATCCTTTATTcctgccacagagagacagctGTCCTCTCTAACACCTGTAGATAGACTGAAAGTGCTCTGTAGTCAAAAGGATGCTCTGAAGCTGGATTAGAGATTAAGAATTTTGATTTAGATGCATCATAGGGAAAGATCTTCTCACTCAGATGAACCGAGAGAACAGTGCCTAGTCATCCTTTTGAAAAAGTCAGGTTCCAGGAACGGTTGTCCGGCCTGCTCCAGGTTACAGGTaggttcatttttaaatgacgtTCCCTGTCTCTAATCATGACAATTTACTGTACACTTTGACAATCACTGATTATTAACAGACAACAAGTGAAGTGCAGGGGAATAATTCAGTTCACACCTTGTCATTCAACAACTCAGTGTCAATACAGGCACGATGTCATACTAAAGACATGCATGGGTTGGGGGGGTTGGCATTTGTATGATATACTTGTAAACACTGTGtaaaaaatgtactaaaattGAGTGTTACAGAATActtgttgtatttgtatataaaataccaTACAAATCATAGCAAAATGGTTGATTTTAGGAGACTATAAAAgatgctaataaataaacaggtcAGCGTAAGGGGGTTTAACGGCACTGGAGTTGTGTTCCCTTGTGAAGGACAGGCTGCAGTGAAGTCCCGACACAGAAT

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99891 True 1714 lncRNA 0.36 1 26078800 26080513

Neighbor

gene id symbol gene type direction distance location
AMCG00010349 NA coding downstream 138685 25914914 ~ 25940115 (-)
AMCG00010348 NA coding downstream 167629 25891998 ~ 25911171 (-)
AMCG00010342 NA coding downstream 866301 25201333 ~ 25212499 (-)
AMCG00010341 NA coding downstream 912824 25158070 ~ 25165976 (-)
AMCG00010339 dcc,LOC106593392 coding downstream 958457 25118889 ~ 25120343 (-)
AMCG00010350 NA coding upstream 1467 26081980 ~ 26118160 (-)
AMCG00010351 NA coding upstream 116528 26197041 ~ 26202850 (-)
AMCG00010352 NA coding upstream 123969 26204482 ~ 26219813 (-)
AMCG00010363 ptbp3,LOC107658670,LOC107744247 coding upstream 144774 26225287 ~ 26247508 (-)
AMCG00010370 NA coding upstream 348394 26428907 ~ 26444908 (-)
G80094 NA non-coding downstream 9175 26069303 ~ 26069625 (-)
G80080 LOC108430444 non-coding downstream 56842 26018963 ~ 26021958 (-)
G79984 NA non-coding downstream 192310 25844343 ~ 25886490 (-)
G79963 NA non-coding downstream 354123 25724477 ~ 25724677 (-)
G79882 NA non-coding downstream 1274637 24800669 ~ 24804163 (-)
G80090 NA non-coding upstream 46543 26127056 ~ 26127305 (-)
G80100 NA non-coding upstream 48453 26128966 ~ 26129228 (-)
G80102 NA non-coding upstream 77083 26157596 ~ 26158155 (-)
G80103 NA non-coding upstream 77713 26158226 ~ 26158788 (-)
G80104 ugcg,LOC106572764,LOC106568572 non-coding upstream 79817 26160330 ~ 26161258 (-)
AMCG00010343 hook3 other downstream 522720 25516064 ~ 25556080 (-)
G79601 NA other downstream 2713853 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 2992455 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 4096750 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 4506288 21541019 ~ 21572512 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 287419 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 331697 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 3872177 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 4430457 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 4991939 31072452 ~ 31080322 (-)

Expression


Co-expression Network