AMCG00010342


Basic Information

Item Value
gene id AMCG00010342
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 25201333 ~ 25212499 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010342
ATGTTCAATGAGAAGCAGGAGATCGATGGTTTGAACCCTGGCACAGTTGCCAGCCGGGCTTTGAAACCCTTGGGCTCACAAGCAAAAAGTTTCACTGCCTTGAAGTTCACACTAGAGCCAGCTGACACCATCACTGTGAGAGGGGGCAATGTGCAACTGGACTGTGCGGCGGAGTCGGATCAAGGCACTCCAGTCATATCGTGGAAGAAGGATGGCATATTCTTGAATGCAGTGGTGGATGAAAGGAGGCAGCAGCTATCAAATGGGTCTCTCATAATCCAGAACGTGGTGCATTCACGGCACCATCGACCCGATGAGGGGTTGTACCAATGCCTGGCTTCTATGGAGGGCGTAGGAGCCATTGTGAGCAGAATGGCCAAAGTAACGGTGTCTGGTGAGTGA

Function

GO:

id name namespace
GO:0016358 dendrite development biological_process
GO:0050918 positive chemotaxis biological_process
GO:0030516 regulation of axon extension biological_process
GO:0071678 olfactory bulb axon guidance biological_process
GO:0021960 anterior commissure morphogenesis biological_process
GO:0033564 anterior/posterior axon guidance biological_process
GO:0048665 neuron fate specification biological_process
GO:0007155 cell adhesion biological_process
GO:0038007 netrin-activated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0038006 netrin receptor activity involved in chemoattraction molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010342 True 402 mRNA 0.52 2 25201333 25212499

Neighbor

gene id symbol gene type direction distance location
AMCG00010341 NA coding downstream 35357 25158070 ~ 25165976 (-)
AMCG00010339 dcc,LOC106593392 coding downstream 80990 25118889 ~ 25120343 (-)
AMCG00010340 dcc coding downstream 139429 25018454 ~ 25061904 (-)
AMCG00010335 NA coding downstream 350557 24833662 ~ 24850776 (-)
AMCG00010337 NA coding downstream 368789 24827508 ~ 24832544 (-)
AMCG00010348 NA coding upstream 679499 25891998 ~ 25911171 (-)
AMCG00010349 NA coding upstream 702415 25914914 ~ 25940115 (-)
AMCG00010350 NA coding upstream 869481 26081980 ~ 26118160 (-)
AMCG00010351 NA coding upstream 984542 26197041 ~ 26202850 (-)
AMCG00010352 NA coding upstream 991983 26204482 ~ 26219813 (-)
G79882 NA non-coding downstream 397170 24800669 ~ 24804163 (-)
G79881 NA non-coding downstream 442070 24723835 ~ 24759263 (-)
G79872 NA non-coding downstream 550701 24601132 ~ 24650632 (-)
G79837 NA non-coding downstream 891144 24307904 ~ 24310189 (-)
G79648 NA non-coding downstream 1735122 23461762 ~ 23466211 (-)
G79963 NA non-coding upstream 511978 25724477 ~ 25724677 (-)
G79984 NA non-coding upstream 631844 25844343 ~ 25886490 (-)
G80080 LOC108430444 non-coding upstream 806464 26018963 ~ 26021958 (-)
G80094 NA non-coding upstream 856804 26069303 ~ 26069625 (-)
G80095 NA non-coding upstream 866301 26078800 ~ 26080513 (-)
G79601 NA other downstream 1836386 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 2114988 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 3219283 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 3628821 21541019 ~ 21572512 (-)
AMCG00010247 NA other downstream 4119508 21053624 ~ 21081825 (-)
AMCG00010343 hook3 other upstream 303565 25516064 ~ 25556080 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 1155433 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 1199711 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 4740191 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 5298471 30510970 ~ 30520381 (-)

Expression


Co-expression Network