AMCG00010350


Basic Information

Item Value
gene id AMCG00010350
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26081980 ~ 26118160 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010350
ATGTTTTCATCCGTGAAATACCGAGCTGTGGAGTATGTGTGCGAGGCTTCTACAAGACAGAGACTGACAGTCAACTGGCTGGTTGTCCCTGTGCCACAGCACCTGGACCAGACTGATCAATACTCCTACAAAGGGAGTCTGTCAGATGACACCTATAGGAAACCTTGGACCCGAGGATCAGTTATCTCCACCTGTAAGCTGATCATCAGGGGATCGGTTCTGGATGACTGGAAGACCAGTGGGTACCCAACGGACTTTCTAGAAAAGATAACAACATCTCTTGTACAAGTTAAAGGTGAAAGAGTGGAAGTGGTGCTCAGCTCTAACCCCACTTCTCAGGCTGATATGGACCTGGGAGAGGCCTTGTGGCTCCTAGGGGAAGCTAGAGAGAAGACAGGGGACATCCTCCAAGAAGAATCCTTCTCAAAGTCTTCTTGGCAAGATCTGTTTGTGCAGGAGGATGTGGTGTTCGCCGACTGCTTGGCCAAGTTCAGGAGACAGATGCCAGAGCTGTACTCTCTGCTGGCCCGGCTGCGGACTGTGTGTGTGCCCGATCCGCTGCTTAATGCCACAGGGGAACCCTTTAGGGAGGACATGTTTTTCAGATGCTTTGTGCCTTTTGAAGAGACCCTgggcacagacacagagggacaaGTGCAAGATCAAAGAACTGAGGAGTTCGGAAAAGTTGCAGTGCTGAATGAAGAGTCTTTGATGTTACCCTTTGAGTTAGATACCTGTAGTCCCTGGCAAAAAGACAGGGCCCTTTCCATCAGGGAGCTTTGTGATGCCTTAGGAGTTATTCCTGAGTTAACAGTGGACGAAATGACATCCCTAGAGATCCTTAGACAAGTCCGTTGCAGGCTGTATACTCAACTGGAAACAGATAATTTGTTCACCACCCCCTGCCAGTCCATCCATCCTACAGCCCACACAACCTGCAGTGAGCTCTCTGCAGAACAGCTGTCCCCGGTCTTTATGCATAGCCTGGTGTCAAATAATGGGAGGGAGGTAATGGAGGGTTTGGTTTGGCAGGCCGAGAAACACCACTCTTCTGTCCTGGGGCTCCTCTTGGCAGAACCACATATTCCAGAATCTGCACTAAAGCACTTGCCTGCCGCAGAGGCCTTTCGTTTGACTGGGGCTGAAGTGGGCTGCTCTGCTAATGAGGCGGTGAGAAGAGATGCTCATGAAAAGCCCAGTCTGAATGTGGACCATTCAGGATTTTTGGAGAATCTTGGGACTCAGGCCACATATGATTCTGCTGAGAAAACAACAGCCCTCAGTGAACACTTCTCCACATTATCCATGATCCAAATAGACAAAAACCCTGTGCAAAATGTCACACCCGGTGCAATCACGGTCAAGTCCATTCTGAAAGACGTGAAGCAGAAGCATCTCACAGCcaagcaggagagagggagagcccTCAAAGTGTCAATCACAGAGGCAGCGGTCACTCAGGCAACTCAGAAGGCAGAGCTTATACCAGCAGGCAGGTGTGAGACGAGTGAGAGAGCATTGCCTGTACAAGAGACGAGCGGTAGCCAGAATGGCCCTGCACAGCCTTCATCTACCCTTCTCCACTTCCCTGTAAAAAACAGCAACGACTGTTACAGCAGTGGTGCAGCTAGCAGGCCACCGCAACCAGATTTGGATCCCCTTGCTACCTTCATAATGTTGAGATCCAAACAGGTGTCAAGAACAACTGCTGCTCCCCAGAACAGCAGAGCCAAGAACCAGAATCAGACAGAACCCAAGAAAGATGTGAATTCCTGGTGTGCTGGCTCAGTAGATACAGGTGGGTCTGAAGGACTCACAGAAACTAAAGATCAAGCCACCAGCAGCAGTCTAGTGATTGAAGTCCAAGCCTCAGAGAGTCAGTGTCAAGCCTATTCACAGCTTAGTGCATTAGCCACAGCCTTCCTGTCCTCTCCAGAAGAGCCGGGCACGTCTGCAGCTGCCTGTGGGAGTTTCGCCACTCTGACATCTGACCAAACACGCTTCTCTCTGAAGCAACAGGAGAAAGAACTCAGCAGTGGCCTGAAGCAAGGTAACGCCAGTGAGAGAGGTGTGGCGCTGTACAAGCGGGCTGCACTGGTGCACCTGCTAGTGACGGTGCGAGACCTTCTGCTGATGTGTGACCTGAACACTGCTGTAGACTATCTGGTAGAAGCCAAGGAAACATATGTGGGGACTCTAGGGACTTGCTTGGATGACATCTGGATGAGGCTGCGTGTGGTGCAGTACAGCAGTCTGAAGAATGATGAAGCTAATCCCAAAATAGCAGAACTCCAGAAACAGATGCTGGCTTGGGTACAGAGAAGCAGTTCTCAGGACCAAAGTCCAAAAAGGTATTCATGTGTGATCGCCTGCAGCCACCATATCCACGCTGACTTTCCCTGGCAGCAGTTCTCTCTGGTTGTGGAGTATGACTGCTTGGAGCATTCTGGCTGGACTGAACTCTGCACAGAGAAGCACATCAGTCACAtgacttttaaaacaattctgtCTGCCCCCATCGCCCCAACTACAGAGCACAAGCACAGTCAGCCCCCCCTGCTCCTGGAGCTCCAAGTCCCTGTGGTGTTGCTGACCACAGAAGGCCTGTCCAATACCCCAGAGCTGCTCCAGATGCTGGAGTCCAGGTACCCTTTCACCAGGGAGGTCTTCAACAACCTAGTGTTGATCTACTCTGCCATTGTGCTGTTTGGGCTCAAGTCTGAGGACTTGGATATCAAGGTGGTCATTACCACAGGAGTTGCTGACACAGCCCAGCTGGTGTGTCAGATTGCCAGCGACACTCTCACGAGCTCCAAGAGAGACCCGCTGACACGGCTCGACCGGTCCTGGCTCTCTGTGGCTCCCTCAGAGGCTGAGAGGTGCCTGTTGTCATTCCCCTGTATTAACCCTCTGGTGGCGCAGCTCATGCTGCGAAGGGCCACATCACTGGAGTGGCTTCTTGGGGCCACCTTGACAGCACTACAGAAACTGTTCCCAGAGGTGCCCCCCAAAGTCATCAAGCACTTCAGCGACACCACGGCTCTTTACAAGTTGAACGGATCTCACTCTCCTCCAACCTCTTTGGCTCAAGATCCCCTTAAGCAGTACTCAGATCCCAGCAGAGAAGGTCCTCAGAGCAGGCTAGAGGATTTAGACCAAAATTACGAGTTCTACTCTGAGGTGGACCTCTTAGGTAGGCAGTGGGGATGCAGTGGGGATCAGACACTGAGACGGATGGATGAGGAGTGTGCCCTGCAGTTTCCGGCCTCTAAATTTGGGGGGCGTCATTCTGAGAGGGGGTCAGGAGGACCAGCACAGCCAGAGATGTCTGCCATAGGCTACAGTGACCTTCAGGACTACGACCACGATGGTCTCTTTGAGAGGAGACCCCTTAGTTACTATGCCCAGCAGCCTACTCATGCGTCTCAGTTTAGCGTGGGTTTCCCTGACCCCCTGTGCCACAGTGAAGGCTTTTATATGCCACGGAAGTCACCTGAAACCCTGAGGGGTGGCGGCATCACTCCCTTTGGCCGTGCCTCGGGATTGCTAGCAGACTCTGTGTTTGGCTTCAGCAAGACCCAATACTCCGCTCAGCTGTGTGGCCACCAAGACATGGTGGGGCCCATCAGAAGCACATCAGAGAGGAAAAGGGGAGCTGGAAGCCCAGAGGAGGAGGTGGCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010350 True 3687 mRNA 0.52 22 26081980 26118160

Neighbor

gene id symbol gene type direction distance location
AMCG00010349 NA coding downstream 141865 25914914 ~ 25940115 (-)
AMCG00010348 NA coding downstream 170809 25891998 ~ 25911171 (-)
AMCG00010342 NA coding downstream 869481 25201333 ~ 25212499 (-)
AMCG00010341 NA coding downstream 916004 25158070 ~ 25165976 (-)
AMCG00010339 dcc,LOC106593392 coding downstream 961637 25118889 ~ 25120343 (-)
AMCG00010351 NA coding upstream 78881 26197041 ~ 26202850 (-)
AMCG00010352 NA coding upstream 86322 26204482 ~ 26219813 (-)
AMCG00010363 ptbp3,LOC107658670,LOC107744247 coding upstream 107127 26225287 ~ 26247508 (-)
AMCG00010370 NA coding upstream 310747 26428907 ~ 26444908 (-)
AMCG00010373 NA coding upstream 388121 26506281 ~ 26527369 (-)
G80095 NA non-coding downstream 1467 26078800 ~ 26080513 (-)
G80094 NA non-coding downstream 12355 26069303 ~ 26069625 (-)
G80080 LOC108430444 non-coding downstream 60022 26018963 ~ 26021958 (-)
G79984 NA non-coding downstream 195490 25844343 ~ 25886490 (-)
G79963 NA non-coding downstream 357303 25724477 ~ 25724677 (-)
G80090 NA non-coding upstream 8896 26127056 ~ 26127305 (-)
G80100 NA non-coding upstream 10806 26128966 ~ 26129228 (-)
G80102 NA non-coding upstream 39436 26157596 ~ 26158155 (-)
G80103 NA non-coding upstream 40066 26158226 ~ 26158788 (-)
G80104 ugcg,LOC106572764,LOC106568572 non-coding upstream 42170 26160330 ~ 26161258 (-)
AMCG00010343 hook3 other downstream 525900 25516064 ~ 25556080 (-)
G79601 NA other downstream 2717033 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 2995635 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 4099930 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 4509468 21541019 ~ 21572512 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 249772 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 294050 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 3834530 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 4392810 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 4954292 31072452 ~ 31080322 (-)

Expression


Co-expression Network