AMCG00010373


Basic Information

Item Value
gene id AMCG00010373
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26506281 ~ 26527369 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010373
ATGCGAGAACGATGGCTTCTCCAGGGAACTCCTGTGGCCAcaaaggaggaggaagaagccCGGAGGAGACAGACTGAAGAGGACGAGCTGAAGGTGAAGAAACTGGAAGACAACATTCACAGATTGGAGACTGAGATTGATCAGCTGGAGAGCGAGGAATCTCAGATTTCTGCAAAAGAACAAGTTCTCAGAGAAAAGCTGCGAGAGACGGAAAAGTCCATCGAAGACTTGCAGAAAAGTCTCCTGAAGCAAGACGGAGATGTGGTGAATTATATTTACTCCCAGATTCCTGACCTCCCCGAGCTCTACACCCAAAGATCTGAGGTGGCGTCTGGGGACGAGCGACTCCAAAGGAAAGCTGCAATATACGCCATGGAGATCAATGTGGAGAAAGACAAGCAGACAGGTGCCACCAAGATTctgtctgcctccacagtgagCCCCGAGGACGTCCACCAAAGAGGGGTGAAGGTCTACGATGATGGCAGGAAGGTTGTATATGAAGTTCGCTCAGGAGGGACCACGACATTGGAGAATGGGGTCCATCCCTGGAGTTCCTCTGAGGTCGAtgaactaatgcaaagagtggGGCAGTCTCAGACCAAAGGAGACTCAGGAAGGGTAGTGGTGTCTCCTAGAGATATGGCCACCGCTGGCAGTGGCAACCTAGTAACAAAGGAACAGATGGTCCATAAGGAAGCCAAGTTGGAGATGGTGCGCAACCCAGGCGGCAAGGGGACTGCCGGGCAACCGAAATACAGCTATGACGAGGTGATTGAAGTGCCAGAAGCAACTTCAGACAAACCGGTGACCATGATTTTCATGGGCTATCATAACGTGGAGGATGAGGAAGAAACCAAGAAGCTTCTGGGTTTTGACGGTACCATTAAGGCCGAGATTGTACTGATCGATGAAGATGATGAGAAGTCCCTGCGGGAGAAGACTGTCACTGACATATCTACAATGGATGGCAACGCTGCAGACCTGGTGTCCGGCCGGCCCCTGTCAGACACCACTGAACTGTCCTCTGAAGGAAAAGACGAAAGCTCAACCAAGGAGCCCCCGCCCGCAggtattcaaaagaaaaagcgCTGTCGGTGCTGTACTATCATGTGA

Function

GO: NA

KEGG:

id description
K16519 AKAP2; A-kinase anchor protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010373 True 1116 mRNA 0.51 5 26506281 26527369

Neighbor

gene id symbol gene type direction distance location
AMCG00010370 NA coding downstream 61373 26428907 ~ 26444908 (-)
AMCG00010363 ptbp3,LOC107658670,LOC107744247 coding downstream 258773 26225287 ~ 26247508 (-)
AMCG00010352 NA coding downstream 286468 26204482 ~ 26219813 (-)
AMCG00010351 NA coding downstream 303431 26197041 ~ 26202850 (-)
AMCG00010350 NA coding downstream 388121 26081980 ~ 26118160 (-)
AMCG00010375 grin3a,LOC107653477,LOC107750958,LOC107702562,LOC107710005,LOC107554227 coding upstream 232753 26760122 ~ 26778863 (-)
AMCG00010376 NA coding upstream 333183 26860552 ~ 26861050 (-)
AMCG00010387 musk coding upstream 1205774 27733143 ~ 27753037 (-)
AMCG00010389 NA coding upstream 1251531 27778900 ~ 27781304 (-)
AMCG00010388 NA coding upstream 1270958 27798327 ~ 27809635 (-)
G80150 NA non-coding downstream 94829 26409985 ~ 26411452 (-)
G80148 NA non-coding downstream 107923 26397739 ~ 26398358 (-)
G80147 NA non-coding downstream 109203 26396801 ~ 26397078 (-)
G80112 hsdl2 non-coding downstream 192030 26308543 ~ 26314251 (-)
G80104 ugcg,LOC106572764,LOC106568572 non-coding downstream 345023 26160330 ~ 26161258 (-)
G80181 NA non-coding upstream 98663 26626032 ~ 26626332 (-)
G80182 NA non-coding upstream 102396 26629765 ~ 26630005 (-)
G80183 NA non-coding upstream 104410 26631779 ~ 26632088 (-)
G80185 NA non-coding upstream 108613 26635982 ~ 26639684 (-)
G80218 NA non-coding upstream 675662 27203031 ~ 27203394 (-)
AMCG00010371 NA other downstream 79623 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 126534 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 950201 25516064 ~ 25556080 (-)
G79601 NA other downstream 3141334 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 3419936 23082655 ~ 23086345 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 3425321 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 3983601 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 4545083 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 5427001 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 6465918 32993287 ~ 32999999 (-)

Expression


Co-expression Network