Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010376 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 26860552 ~ 26861050 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010376 | True | 489 | mRNA | 0.44 | 2 | 26860552 | 26861050 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010375 | grin3a,LOC107653477,LOC107750958,LOC107702562,LOC107710005,LOC107554227 | coding | downstream | 81689 | 26760122 ~ 26778863 (-) |
| AMCG00010373 | NA | coding | downstream | 333183 | 26506281 ~ 26527369 (-) |
| AMCG00010370 | NA | coding | downstream | 415644 | 26428907 ~ 26444908 (-) |
| AMCG00010363 | ptbp3,LOC107658670,LOC107744247 | coding | downstream | 613044 | 26225287 ~ 26247508 (-) |
| AMCG00010352 | NA | coding | downstream | 640739 | 26204482 ~ 26219813 (-) |
| AMCG00010387 | musk | coding | upstream | 872093 | 27733143 ~ 27753037 (-) |
| AMCG00010389 | NA | coding | upstream | 917850 | 27778900 ~ 27781304 (-) |
| AMCG00010388 | NA | coding | upstream | 937277 | 27798327 ~ 27809635 (-) |
| AMCG00010391 | NA | coding | upstream | 958009 | 27819059 ~ 27845351 (-) |
| AMCG00010386 | NA | coding | upstream | 986874 | 27847924 ~ 27849584 (-) |
| G80185 | NA | non-coding | downstream | 220868 | 26635982 ~ 26639684 (-) |
| G80183 | NA | non-coding | downstream | 228464 | 26631779 ~ 26632088 (-) |
| G80182 | NA | non-coding | downstream | 230547 | 26629765 ~ 26630005 (-) |
| G80181 | NA | non-coding | downstream | 234220 | 26626032 ~ 26626332 (-) |
| G80150 | NA | non-coding | downstream | 449100 | 26409985 ~ 26411452 (-) |
| G80218 | NA | non-coding | upstream | 341981 | 27203031 ~ 27203394 (-) |
| G80221 | NA | non-coding | upstream | 362772 | 27223822 ~ 27224149 (-) |
| G80234 | NA | non-coding | upstream | 416788 | 27277838 ~ 27278074 (-) |
| G80248 | NA | non-coding | upstream | 688586 | 27549636 ~ 27553011 (-) |
| G80250 | LOC107575789 | non-coding | upstream | 695381 | 27556431 ~ 27557033 (-) |
| AMCG00010371 | NA | other | downstream | 433894 | 26412210 ~ 26426658 (-) |
| AMCG00010364 | inip,LOC107658659,LOC107558675,LOC107571239 | other | downstream | 480805 | 26367932 ~ 26379747 (-) |
| AMCG00010343 | hook3 | other | downstream | 1304472 | 25516064 ~ 25556080 (-) |
| G79601 | NA | other | downstream | 3495605 | 23359643 ~ 23364947 (-) |
| AMCG00010288 | NA | other | downstream | 3774207 | 23082655 ~ 23086345 (-) |
| AMCG00010442 | LOC107672760,LOC107738293,LOC107592320 | other | upstream | 3091640 | 29952690 ~ 29961324 (-) |
| AMCG00010458 | LOC107396140 | other | upstream | 3649920 | 30510970 ~ 30520381 (-) |
| AMCG00010478 | znf367,LOC107568105,LOC107704585 | other | upstream | 4211402 | 31072452 ~ 31080322 (-) |
| AMCG00010487 | ppip5k2 | other | upstream | 5093320 | 31954370 ~ 31997694 (-) |
| AMCG00010509 | fem1c,LOC106580179 | other | upstream | 6132237 | 32993287 ~ 32999999 (-) |
