G80181


Basic Information

Item Value
gene id G80181
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26626032 ~ 26626332 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100011
AGTTATAAACAGTGAAAGTGTCTTGATTTCCGCCTCTTGTCAATGAGTTTGTATCACTGTAGTAAAGCTGTCCCTGTCTCTTCGAGAGTAGGGCTTTTGTAAATCTccataacaaatacaataaacttgGGATCTCCTTCTGATGATCAAACACAACAGTACCCGCTTTGTATAAACGGTAAGAACGATAAATATAGGTATAAAACAGATATATTATGATCGTAACTAATACAACTACTATCAAGGGTAAAAGAAAACTTCCCATATTAGCTGATCTGTTTCTTACACAGCCACCTTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100011 True 301 lncRNA 0.36 1 26626032 26626332

Neighbor

gene id symbol gene type direction distance location
AMCG00010373 NA coding downstream 98663 26506281 ~ 26527369 (-)
AMCG00010370 NA coding downstream 181124 26428907 ~ 26444908 (-)
AMCG00010363 ptbp3,LOC107658670,LOC107744247 coding downstream 378524 26225287 ~ 26247508 (-)
AMCG00010352 NA coding downstream 406219 26204482 ~ 26219813 (-)
AMCG00010351 NA coding downstream 423182 26197041 ~ 26202850 (-)
AMCG00010375 grin3a,LOC107653477,LOC107750958,LOC107702562,LOC107710005,LOC107554227 coding upstream 133790 26760122 ~ 26778863 (-)
AMCG00010376 NA coding upstream 234220 26860552 ~ 26861050 (-)
AMCG00010387 musk coding upstream 1106811 27733143 ~ 27753037 (-)
AMCG00010389 NA coding upstream 1152568 27778900 ~ 27781304 (-)
AMCG00010388 NA coding upstream 1171995 27798327 ~ 27809635 (-)
G80150 NA non-coding downstream 214580 26409985 ~ 26411452 (-)
G80148 NA non-coding downstream 227674 26397739 ~ 26398358 (-)
G80147 NA non-coding downstream 228954 26396801 ~ 26397078 (-)
G80112 hsdl2 non-coding downstream 311781 26308543 ~ 26314251 (-)
G80104 ugcg,LOC106572764,LOC106568572 non-coding downstream 464774 26160330 ~ 26161258 (-)
G80182 NA non-coding upstream 3433 26629765 ~ 26630005 (-)
G80183 NA non-coding upstream 5447 26631779 ~ 26632088 (-)
G80185 NA non-coding upstream 9650 26635982 ~ 26639684 (-)
G80218 NA non-coding upstream 576699 27203031 ~ 27203394 (-)
G80221 NA non-coding upstream 597490 27223822 ~ 27224149 (-)
AMCG00010371 NA other downstream 199374 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 246285 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 1069952 25516064 ~ 25556080 (-)
G79601 NA other downstream 3261085 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 3539687 23082655 ~ 23086345 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 3326358 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 3884638 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 4446120 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 5328038 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 6366955 32993287 ~ 32999999 (-)

Expression


Co-expression Network