AMCG00010438


Basic Information

Item Value
gene id AMCG00010438
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 29825907 ~ 29832546 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010438
ATGgctgtcaaaatgtttttgttagaaAGTCCTTTCATAAACCTCTCTAATATAACAGTTGCCCTCTGTGCATTCATTGTGGTCATGGTTGCCCTAAGAAGCAGGAAAAGAGTGAGAAAAGACCAGAGTCATCCACCTGGACCAACACCTTGGCCAGTCATAGGTAACATGTTTCAGATGGGGGAACAACCTCATATATCTCTCACAAAGTTGAGGGACATGTATGGAGATGTTTTCCAGCTGAAAATGGGCTCTTTGCTTGTGGTGGTATTGAGTGGTTATGATACCATTAAGAAAGCGTTGGTCAGACAGGGAGAAAGTTTTGCTGGCAGGCCAGAGTTGTTCACGTTTTCGGTCATATCAAATGGGACTAGCATGACTTTCAGTGAGAAGTACGGGGAGAGTTGGATTCTCCACAAGAAGATATGCAAGAACGCACTTAGAACCTTTTCTCAGGCAGAGGCAAAAAACTCCACCTGCTCGTGTCTCTTGGAGGAGCACATCTGTTCTGAAGCCTCGGAGATGATTAGCATGATGATGGAACATCCCTGTAACGAAAAAGGCTTTGACCCTACTATCCCCATCGTCAGTTCAGTTGCTAATGTAGTTTGTGCATTGTGCTTTGGCAAGAGATATGATTATAAAGATAAAGAATTCCTCAATATTGTCCATATCAATAATGAAGTCCTCAGAAATTTTGCTGCTGGAAATCTGGCagatttttttccagtttttcgCTACCTACCAATTCCGACACTTCGGACATTAGTCCAATTCATACGCAGaatgaattttttttttgccagaaaCATAGAagaacatttaaacacatttgacaaGAACTGCATCAGAGACATTACAGATGCTCTGATTGCTCTGTGTGAAGACAGACATGAAGACAGGAACAAATGTATGCTATCCGACAGCCAGATAATTCAAAGTGTCATCGACATATTTGGGGCAGATGATACAATTGGCTCCAGCAGACTTCCGAGATTTGAAGACAAGCCAAACATGCCTTACACTGAGgcatttatatatgaaatattcCGACATACATCATACGTCCCATTCACTATACCTCACTGTACCACAGAGAACACCACCCTGAATGGATATTTCCTTCCCAAAGACACCTGTATTTTCATCAATCAATATCAAGTCAATCATGATATTGCGTTGTGGAAAGATCCAGATGTGTTTCAGCCTGAACGATTTTTAGATGAGTCGGGACAAATAAGCAAGGACTTGACAGAAAAAGTATTAATATTTGGAATGGGTAAGAGGAGGTGCCTGGGAGATAGCTTTGCCCGGCTggagatgtttattttcttaacaacTTTGCTTCATCGGttccagtttaaaaatgtatgtggtcAAAAACTAAATCTAACTGCAGATTTCGGGCTAACAATGAAGCCCAAGCCATATAAGATCAGTCTATCTCAGCGATTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010438 True 1458 mRNA 0.41 5 29825907 29832546

Neighbor

gene id symbol gene type direction distance location
AMCG00010439 NA coding downstream 50116 29768426 ~ 29775791 (-)
AMCG00010435 rorb,LOC107744430,LOC107599920,LOC107730723 coding downstream 254517 29563334 ~ 29571390 (-)
AMCG00010436 LOC107557575 coding downstream 331475 29484081 ~ 29494432 (-)
AMCG00010428 pcsk5 coding downstream 387311 29432797 ~ 29438596 (-)
AMCG00010426 pcsk5 coding downstream 409912 29409172 ~ 29415995 (-)
AMCG00010444 NA coding upstream 6630 29839176 ~ 29914364 (-)
AMCG00010443 NA coding upstream 104808 29937354 ~ 29948993 (-)
AMCG00010452 LOC107734934 coding upstream 439140 30271686 ~ 30284636 (-)
AMCG00010451 NA coding upstream 452635 30285181 ~ 30307452 (-)
AMCG00010454 NA coding upstream 487670 30320216 ~ 30326313 (-)
G80609 NA non-coding downstream 312493 29510920 ~ 29513414 (-)
G80608 NA non-coding downstream 319347 29506154 ~ 29506560 (-)
G80592 NA non-coding downstream 510048 29314958 ~ 29315859 (-)
G80566 NA non-coding downstream 528837 29292499 ~ 29297070 (-)
G80538 NA non-coding downstream 755409 29068455 ~ 29070498 (-)
G80709 NA non-coding upstream 167283 29999829 ~ 30021876 (-)
G80725 NA non-coding upstream 270863 30103409 ~ 30103647 (-)
G80778 NA non-coding upstream 392379 30224925 ~ 30271665 (-)
G80777 NA non-coding upstream 421249 30253795 ~ 30259308 (-)
G80786 NA non-coding upstream 513919 30346465 ~ 30385247 (-)
AMCG00010371 NA other downstream 3399249 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 3446160 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 4269827 25516064 ~ 25556080 (-)
G79601 NA other downstream 6460960 23359643 ~ 23364947 (-)
AMCG00010288 NA other downstream 6739562 23082655 ~ 23086345 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 120144 29952690 ~ 29961324 (-)
AMCG00010458 LOC107396140 other upstream 678424 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 1239906 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 2121824 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 3160741 32993287 ~ 32999999 (-)

Expression


Co-expression Network