AMCG00010451


Basic Information

Item Value
gene id AMCG00010451
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30285181 ~ 30307452 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010451
CTGTGTGAAAAAACTAATTGGAAAAAGACAGAAATTGGCATATACACAGATAGAACAGAACAGTACCTCTGTTTGCAAAGAAATGAAACAATGAACCAGCAGGAAAAATAGGTCGAATACAAGAGACCGGCTAGATAATTTATGCAGAAATGTGAACCATGCTTGTCTGTTTTACTCTTATGTTGTAGAAAAAAAGAGACTGATGAACATGCACTTTCCTTAGAGGTGTAGCCTTGAGGATCTGGTATGTATTACAgagcctccctccctcttcggAGCACTCAGCAGCATGCCAGCTGCAGTCTCACAGCTGAGATTAAACCATATTAATGTGATGActacaaaaatcattaaaacacaaaaaatcatTGTTTAATTCCGTTTTGTCTCTCAGGAAAACAACGAGAAGTTGATTGTCAAAGATACTCTGCCTCCTTAATGCAAATGCATGCCTTGGTTTCCCTTCCTTTGACTTCTTGAGAAACAGAGAACAATTACTTCAGTGGACCTTTCCTCCTGCTTCTTCAATACAGTGCTGCAATGCTCTCTCTTTGTGTCTTGATACTGCAAGttTTGCTGTCTGTCAGTGCACAGCAGCAGCTACCAGGATCCTGCACGTTTGAGCAAAGCACTTGTGGATATGTATCAGATCCTGCACACTTGAAATGGGTTCTAAATGAAGAAGGGCGATTCATGGACTCTGTCTTCATGGAGGGGAGTGGGAGTGAGAAGGCTGTGCTGATCAGTCCTGAACTGGAGCTGCTGGAGTGGAGCTGCCTCAGACTGGTTTATCAGATCACAGGCTCTGGCTCCCTAGAGATGCAATTGAGGCCAGAAGGAGAGAGCTTTGACTACAGGCTGTGGTCATCAGACCAGGCCTCTGACAGCTGGCTCATTGCAAGTATAGACCTCAGGAACACGACAAGCACATACAAGATCTTAATGGAAGCCAGACCTGGAAAAGAAACAGGCAATAGTGTTGCTATCTTTGAAATACACATTGTTTCTGGATACTGTATTGAGTGTAACTTTGAAGAACACCATCTGTGTGGCTATAGCAACTTCTGGAATCCCAATGTGAATTGGTATGTGGGTGGAAGCAGTGCCAGAGATCCCCAATCCAATCTACCTGATGACCACACAATGAGTAATCAAAGAGGTCATTACATGTATGTGGATTCAATTTATGCCAAGAACTTTCAGGAAGTGGCCCAGCTGTCATCACCCATGACAATCACAGCAATGTCAGGCTGCTTGTCCTTCTACTACCAGCGGGACCAAGAGCGAGGCAACATCTTCTCTGTGTTCACGAGAGACAAACTGGGCCAATACGAGGAAATCTGGAGACCTGATTTTTATGCGACATCAATCTGGAAATTAGTTGTTTTTGAAGTTGCCTTTAATAGTGCCAGGGGAGGATATGTTGCTCTGGATGACATTTCATTCTCTCCAGAATTCTGCAGCATGGAGACAGAGCCTTTCTTTGATCCTTCCATCGCCAACTGTGATTTTGAAGAAAATTTCTGTCATTACTATCAGGAGCGCATAGAAGGTTCTGTATGGAACAGAATTTCAGTGAAACCCAATCTGTATAGAATAGGAGATCATACTACCGGTTCAGGTTCTTTCTTGTTGGCCAACACCAGGTTTACATCAAGGCCAGGCTACGTTGGGCGACTCTACGGACCCTACCTGCCAGGAAATTTGAAGTACTGTCTGAAgttttattatgtattgcaTGGGTTTATGAAAATAGACAATGCCCTAGCTGTTTATATCTATGACGAGAACAACATTGCCCAGGAGAAAGTCTGGACGATTTCTGAAAGTTCAAGAGGAGTCTGGACTGAGGTTGAAATCACCTTCCTAAAGCCAATGCCAACAAAGGTGGTTTTTGTTAGCATTTGTAAAAATTTCTGGGACTGTGGATTGGTGGCActtgatgacatcactgtgaGTCTTGGCGACTGCCGGATCTCCGAAGGGATGTTTCCTTCAGCTCCAGGGCAATGCAATTTTGAGATGGACGATTGTGGATACACACAAGATGAGAATGACAGAGGGAACTGGTTTCGAATCAGAGGACAGACACCTACATCTTATACGGGGCCAAATGGAGATCACACCTCAGGGGTAGGTTACTACATGTACATTGAAGCCTCCCACATGATTCCTGGGCACAACGCCCGTCTAATGTCAAAAGAGCTGCGTGGCTTCCACACCCAGCAGTGTTTGGTGTTTTATTACCACATGTATGGGTCTGGCACTGGCATGCTGAGTGTGTACTTgaagaaggagggagagagaagggaatcGCTGCTCTGGAGGCAACGCGGAGAGCATAGCATCTCTTGGATGAGGGGAATGGTGGGGTACGAGTGTGATCACAATCACAAGATTGTCTTTGAAGCTGTACGAGGAATGTCAATAAGAAGTGACATTGCTATCGAtgacattgtttttcaaaaaggaCCATGCAAAGaaTTGGGAGAAATGATGGTTCCCTACTCTGGATTCTCTGAAAACTTCAATGATATAGATTACTGAACATAGTCTGGAATTGGAATGTGGGATTCCAGtacatgatacatttaaaaattgattaaatgattaaggtttatataatataatttgcacAAGTGGCTCCAAAAATGGACATCTCCCATTTTATGTGCTTTAAAATTGCCACCGTATGTGAGGTACTCAAAAGTCCAGATGCTTAGAAAGATGGTTGCACCAGATTTTCCTATTTGAGCTTTTTCACAAATCTAGTTTATTGTTTCATGCCTCAGAATTGGAGCACTCAATGTATTTCCCATCCTAAAATTCCACTTTGATGTGTGTCTACCATCCTGCTTTCTTATATCGAAAACAGGCTAATGttttatgtgcatttcagaATTAGTGCACTTCAGCAAATCTCAACAACATACTGGATGCAAAGAAgcgaacaaacaaacatgaattttACACAATGTTCAAAAGCTTTTGTGTAAGTTTCTTCTTAACTCATTGGTAAACATCAAAACATATCAAATTTTCATCCTGTTGCCAGTTCAAGGTATCACAGggaatatacatgtatataactCCTTAATGACAACAGAAGATTATCCACATTATGGAGAAGGACTTTTGAGaggaggatttttttaaatatgtaaagaatTGTGATTGCTCGtgtacagtttctttttttgtcccttgatttctctctctttgtattAATAACTTCGGACACCTCATTGTGGCCAAGGAGAAATACTTGCAGATTTACCTGTATTCTAAGTATCCTCCTCTTGGTCCAGCAATGAGTAGCGCTATTGTAAAGGTGACACACATATGGACTGTGGTACCTGAAAGAGGATTTATTATTAAGACTAGTTATTTATAGGCTAAAGTGCTGATCAAATGACTCTGCACAATTGTCATTCCCTTCCTTGTTAACACCAGCTGCCACTAGCACCCTTGAATTCTTTCCTACATTTAGCAACACTATGAAGTACATATAGTAGTCTCTTTTTATCGAAGTTTAAtagtttagtttattaaaatagaaGTACACCTATTATTCCTTCAACTATCACAAGAAAGGGACCCCCACTTTTTGTTACAATACAAGTAAGATTGTTACTTTATTGATCAATTTCCCTCAGTTTATCTTTTCagatgtgtatgtatttgtattattctttgcaGTCTAAGGCTACTTTTCTCCACTTATATCAGCATAATCAATCCCATGGAGCTGTCATAGTCTCATGGTAAACTGTAATGCGCCAGAACTATAGGCAATTGACAATGGAATGTTAATGTACAGTATGCCAGAGCtcaatgtgtgcatatatatgttCTTTATGATTCATGGATAATATCGAACTGAGTGggctccagccctggtcctggagagctccaGTACAGCAGGTTTAATAGGTCACccttaaatcaccaatttaATAAGACTTGGTTACACTGAATTACGATCAATTAAGCCGGTTGTAACAATTACCCCTTTGAACTAGGGAATTAAGGTAATTAAGAGATCAAACCCCTGCGCACTGATTAATAACTAacatgtgttcccagtctttAATTTAGGGTGACTATTAAACCAAGAGGATTGGGGCTCCTCAGGACCAGGCAAGGAAACCACTAATATAGCCTGTATTACTTTTCTTAAGAGCTTGCAGTGGTTCAGATATGATACCTACTATTACCATGACATAGGATCAGTTTAACTCCACACTTTATACACTGTTCAATATTAATACACCATTGTCTCCCTAAGAAGACTTCCAGATTATTATCTCAGAATGATGAGCTATCCAATTTTGTGGCATATTTGTACAATCTTTTATCCAGTATCTGGAAGGCTATAAGGTTCAATCCAACATTAATTTATCCAcctggacatttttatttttgagctgAAGCTGGTCTTCACAAGTGAAGCTGATATAGCATACTGTTTAACCCCTTACAGGTATTAAACCTGTTGTGGTAAGGTGCTGTCCTGTATTATTGTGTTAAGACAACTTATTGGAAGAAATGTACTCCCCCTGGTGATAATTTACATCTGGTACTAACACTGCATCCTGTTACTGACCTTTGCTTGCTTTTGGATGCTTGGTTTTATTGAACCTTAAGGCTTGGATTTCAAAACTTGTATTGACCAATTTCCCATGTGTATAATTGTACATGTAAGTAAAACAGATGATTTTTTCGGCATTGTCCCGTGGAGCAAAGTATCCCAACTATCCAAGATCTATAAAAATTAGCAAGCTGTAAATGGACTGAAATGCCACCAATCAACTTGATCTCGAAGGTGTCAGAGTCAGTGACCTGGGTCCAAGATTCGCAGATCTTTATTTGTAACCtctaacaaacatttaaatcctGGGGTTCTACAGTTCACTACAATTAGGCAGGGACAAATAAGTCTAGGTTCAGGGAACAATGCAAGAATTTGCAGAGAGTAAAACCCATGCTCTCTACAGTTCATTTTCATGTCCCCTTGTGTCCTGAAGTGGCTTGGAATCATGGGTATCCATTTCAGGAGGCAATTGAATCTGGACAAGTGCaatttatgtaaatacaaactaaaacatCACATTGGCATTGGTTGAAATTCTGGTACTAAGAAGAATGTAAACAGCATGTGCTTATAAGTTTCAGAGAACTGCATGACAGACATCTTAAGTTTTTAAAGAATACACATTGGCAGCCTTTCATAAACTCTTTAAAAGGTTTTATGTGATTCATGTTTCTTCAAATGTATACATCAGTAAAGTAGAACAtggtctcattttaaaataaacagtgcttACAGCTGCATCTGGGTCAGGTCTGTTCATTATATTGTTgctattgcttttttctttctttctgtcaaGTCTTTTGCAAATATTTGTGCTATAGCTCTTCACATTATAGCTCTGtcatcattattttacaatgcaacattacacaactgacaaagaaaaagcattttgtgGCATAGAAAAGATGATTGATAATGTTGATATAACAGCAAATCTTGTGTGAACTATGACAAACAGTAACCTatgttacttaaaaataaacaaatacatttaatgaatttaaaatgtgtggctTGATTGTTTGTTGTATTACAACTTCCTTGGTAGCTTGGTGTGCATGCCTTCTTTCCAATCCCTT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010451 True 5679 mRNA 0.40 14 30285181 30307452

Neighbor

gene id symbol gene type direction distance location
AMCG00010452 LOC107734934 coding downstream 545 30271686 ~ 30284636 (-)
AMCG00010443 NA coding downstream 336188 29937354 ~ 29948993 (-)
AMCG00010444 NA coding downstream 370817 29839176 ~ 29914364 (-)
AMCG00010438 NA coding downstream 452635 29825907 ~ 29832546 (-)
AMCG00010439 NA coding downstream 509390 29768426 ~ 29775791 (-)
AMCG00010454 NA coding upstream 12764 30320216 ~ 30326313 (-)
AMCG00010453 NA coding upstream 21462 30328914 ~ 30330498 (-)
AMCG00010460 fam189a2,LOC106584888,LOC104953220,LOC106570822 coding upstream 119848 30427300 ~ 30449635 (-)
AMCG00010463 NA coding upstream 145160 30452612 ~ 30473626 (-)
AMCG00010459 NA coding upstream 214804 30522256 ~ 30533666 (-)
G80778 NA non-coding downstream 13516 30224925 ~ 30271665 (-)
G80777 NA non-coding downstream 25873 30253795 ~ 30259308 (-)
G80725 NA non-coding downstream 181534 30103409 ~ 30103647 (-)
G80709 NA non-coding downstream 263305 29999829 ~ 30021876 (-)
G80609 NA non-coding downstream 771767 29510920 ~ 29513414 (-)
G80786 NA non-coding upstream 39013 30346465 ~ 30385247 (-)
G80862 NA non-coding upstream 297062 30604514 ~ 30604750 (-)
G80901 NA non-coding upstream 427332 30734784 ~ 30737394 (-)
G81116 NA non-coding upstream 2160423 32467875 ~ 32468256 (-)
G81138 NA non-coding upstream 2218226 32525678 ~ 32530211 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other downstream 323857 29952690 ~ 29961324 (-)
AMCG00010371 NA other downstream 3858523 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 3905434 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 4729101 25516064 ~ 25556080 (-)
G79601 NA other downstream 6920234 23359643 ~ 23364947 (-)
AMCG00010458 LOC107396140 other upstream 203518 30510970 ~ 30520381 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 765000 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 1646918 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 2685835 32993287 ~ 32999999 (-)
AMCG00010532 ppic,LOC107713556 other upstream 3790894 34098346 ~ 34104672 (-)

Expression


Co-expression Network