G80862


Basic Information

Item Value
gene id G80862
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30604514 ~ 30604750 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100866
aggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaattgataacttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100866 True 237 lncRNA 0.40 1 30604514 30604750

Neighbor

gene id symbol gene type direction distance location
AMCG00010461 pip5k1bb,LOC106585038,LOC105901155,LOC105014287 coding downstream 53263 30545505 ~ 30551251 (-)
AMCG00010459 NA coding downstream 70848 30522256 ~ 30533666 (-)
AMCG00010463 NA coding downstream 130888 30452612 ~ 30473626 (-)
AMCG00010460 fam189a2,LOC106584888,LOC104953220,LOC106570822 coding downstream 154879 30427300 ~ 30449635 (-)
AMCG00010453 NA coding downstream 274016 30328914 ~ 30330498 (-)
AMCG00010462 pgm5,LOC108265775,LOC108442998,LOC107724919,LOC107711872,LOC107689271,LOC107602821,LOC107600012 coding upstream 11547 30616297 ~ 30623685 (-)
AMCG00010464 pgm5,LOC108442998,LOC106580555 coding upstream 30480 30635230 ~ 30641599 (-)
AMCG00010466 NA coding upstream 40575 30645325 ~ 30646374 (-)
AMCG00010465 LOC101168844,LOC107578573 coding upstream 45152 30649902 ~ 30666918 (-)
AMCG00010471 NA coding upstream 209781 30814531 ~ 30839361 (-)
G80786 NA non-coding downstream 219267 30346465 ~ 30385247 (-)
G80778 NA non-coding downstream 332849 30224925 ~ 30271665 (-)
G80777 NA non-coding downstream 345206 30253795 ~ 30259308 (-)
G80725 NA non-coding downstream 500867 30103409 ~ 30103647 (-)
G80709 NA non-coding downstream 582638 29999829 ~ 30021876 (-)
G80901 NA non-coding upstream 130034 30734784 ~ 30737394 (-)
G81116 NA non-coding upstream 1863125 32467875 ~ 32468256 (-)
G81138 NA non-coding upstream 1920928 32525678 ~ 32530211 (-)
G81157 NA non-coding upstream 1955261 32560011 ~ 32591606 (-)
G81258 NA non-coding upstream 2549402 33154152 ~ 33155346 (-)
AMCG00010458 LOC107396140 other downstream 84133 30510970 ~ 30520381 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other downstream 643190 29952690 ~ 29961324 (-)
AMCG00010371 NA other downstream 4177856 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 4224767 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 5048434 25516064 ~ 25556080 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 467702 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 1349620 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 2388537 32993287 ~ 32999999 (-)
AMCG00010532 ppic,LOC107713556 other upstream 3493596 34098346 ~ 34104672 (-)
G81716 NA other upstream 5110201 35714951 ~ 35716672 (-)

Expression


Co-expression Network