AMCG00010466


Basic Information

Item Value
gene id AMCG00010466
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30645325 ~ 30646374 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010466
ATGACCCTGTCTAAAGATGTCGAAATACCTCAACAGCAAACCGTCATCCACCTGGAAGAGGATGAAATCGACATCATTGGGGAAGATGACCTACACGATTGCCGACTTCAGGACGCATACTTGTCCCAGCGAAGTCCCAGAACCGCCTCCCCGGGGTGCGGCGCGGAGCTGGACTGCTGCGAGGCAGACTCAAAAAGGTTTAAGAGACACCAGCCGGAGTTTGTCAAAGACGGACTCGTGTTTTATCCCAATTTCGGTTGTTACCGGCCCTATGGGCGACCCTATGCAATGCAGGCCCAGACCACAGCTGCGCTTAGATATATCCCAGTCCAGGACAGAGTGGTGATGCCACCCGCTGCCCATCCTCTGCAGTACCAGGACGGCAGCAGCAGGAAGGTGCCCGGCCCCAAAGGACTACAGGTGCAGCTCGGGGAGCCGTCTCCGGATCTCGACGCCGCCGGTGGGAGGCCGAGCAAATGCTCATTCAGCATCGACAGTATCATAGGAAAGACCTCTTCATTTTTGCAGCACGCCAGCCTACAGACGACAGTGGACTATTCGCCTTTCCTGCAAAGACCCGCGAGTTGTTTGCTGCCTCCACTGTTATCTGCTCCTCCGAGAACTGTGTTTTGCCCCAGTTCCCTCTTAAGTGCAATTTCGTCCAGTGAAAACGTGCCGATGCCCTACCCACATTGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010466 True 699 mRNA 0.55 2 30645325 30646374

Neighbor

gene id symbol gene type direction distance location
AMCG00010464 pgm5,LOC108442998,LOC106580555 coding downstream 3726 30635230 ~ 30641599 (-)
AMCG00010462 pgm5,LOC108265775,LOC108442998,LOC107724919,LOC107711872,LOC107689271,LOC107602821,LOC107600012 coding downstream 21640 30616297 ~ 30623685 (-)
AMCG00010461 pip5k1bb,LOC106585038,LOC105901155,LOC105014287 coding downstream 94074 30545505 ~ 30551251 (-)
AMCG00010459 NA coding downstream 111659 30522256 ~ 30533666 (-)
AMCG00010463 NA coding downstream 171699 30452612 ~ 30473626 (-)
AMCG00010465 LOC101168844,LOC107578573 coding upstream 3528 30649902 ~ 30666918 (-)
AMCG00010471 NA coding upstream 168157 30814531 ~ 30839361 (-)
AMCG00010472 ptch1 coding upstream 221879 30868253 ~ 30914463 (-)
AMCG00010473 ptch1,LOC107724865,LOC107669660,LOC107689274,LOC107711868 coding upstream 283420 30929794 ~ 30931372 (-)
AMCG00010479 NA coding upstream 385730 31032104 ~ 31072225 (-)
G80862 NA non-coding downstream 40575 30604514 ~ 30604750 (-)
G80786 NA non-coding downstream 260078 30346465 ~ 30385247 (-)
G80778 NA non-coding downstream 373660 30224925 ~ 30271665 (-)
G80777 NA non-coding downstream 386017 30253795 ~ 30259308 (-)
G80725 NA non-coding downstream 541678 30103409 ~ 30103647 (-)
G80901 NA non-coding upstream 88410 30734784 ~ 30737394 (-)
G81116 NA non-coding upstream 1821501 32467875 ~ 32468256 (-)
G81138 NA non-coding upstream 1879304 32525678 ~ 32530211 (-)
G81157 NA non-coding upstream 1913637 32560011 ~ 32591606 (-)
G81258 NA non-coding upstream 2507778 33154152 ~ 33155346 (-)
AMCG00010458 LOC107396140 other downstream 124944 30510970 ~ 30520381 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other downstream 684001 29952690 ~ 29961324 (-)
AMCG00010371 NA other downstream 4218667 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 4265578 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 5089245 25516064 ~ 25556080 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 426078 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 1307996 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 2346913 32993287 ~ 32999999 (-)
AMCG00010532 ppic,LOC107713556 other upstream 3451972 34098346 ~ 34104672 (-)
G81716 NA other upstream 5068577 35714951 ~ 35716672 (-)

Expression


Co-expression Network