AMCG00010461 (pip5k1bb,LOC106585038,LOC105901155,LOC105014287)


Basic Information

Item Value
gene id AMCG00010461
gene name pip5k1bb,LOC106585038,LOC105901155,LOC105014287
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30545505 ~ 30551251 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010461
acaACATCTTCTGCCTTGAAGGGTGCTATCCAGTTAGGAATAGGATACACAGTTGGTAACCTCACATCTAAGCCAGACAGAGATGTGCTTATGCAAGATTTCTATGTAGTAGAAAGTGTGTTTTTACCAAGTGAAGGCAGCAACTTGACTCCTGCGCATCACTACCCAGATTTCCGGTTCAAAACCTACGCTCCCTTGGCATTCCGATATTTCCGAGAGCTCTTTGGGATCAAGCCGGATGATTACTTGTACTCCATATGCAATGAGCCATTAATAGAACTGTCGAACCCTGGGGCCAGTggatctttgttttatttaacaagtGACGATGAATTCATCATCAAGACTGTTCAGCACAAAGAAGCCGAATTTCTGCAGAAACTCCTCCCGGGTTATTACATGAACTTAAATCAAAATCCAAGGACACTTTTGCCAAAGTTTTATGGCCTTTACTGTGTGCAATCTGGGGGAATAAACATCAGACTGGTGGTTATGAACAATGTGCTGCCCCGCTCAGTCAAGATGCACTACAAGTATGACTTAAAAGGGTCGACATACAAGCGCAGGGCATCGcggaaggagagggagaagtcGACGCCCACGTACAAGGACCTGGATTTCTTACAGGACATGCATGAAGGCTTGTACTTTGATGCAGAGACTTATAACGCCTTAATGAAGACCTTGCAGCGTGACTGTCGG

Function

symbol description
pip5k1bb Predicted to enable ATP binding activity and phosphatidylinositol phosphate kinase activity. Predicted to act upstream of or within phosphatidylinositol metabolic process and phosphorylation. Is expressed in blood island. Orthologous to human PIP5K1B (phosphatidylinositol-4-phosphate 5-kinase type 1 beta).

NR:

description
PREDICTED: phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like

GO:

id name namespace
GO:0046488 phosphatidylinositol metabolic process biological_process
GO:0016307 phosphatidylinositol phosphate kinase activity molecular_function

KEGG:

id description
K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010461 True 702 mRNA 0.45 4 30545505 30551251

Neighbor

gene id symbol gene type direction distance location
AMCG00010459 NA coding downstream 11839 30522256 ~ 30533666 (-)
AMCG00010463 NA coding downstream 71879 30452612 ~ 30473626 (-)
AMCG00010460 fam189a2,LOC106584888,LOC104953220,LOC106570822 coding downstream 95870 30427300 ~ 30449635 (-)
AMCG00010453 NA coding downstream 215007 30328914 ~ 30330498 (-)
AMCG00010454 NA coding downstream 219192 30320216 ~ 30326313 (-)
AMCG00010462 pgm5,LOC108265775,LOC108442998,LOC107724919,LOC107711872,LOC107689271,LOC107602821,LOC107600012 coding upstream 65046 30616297 ~ 30623685 (-)
AMCG00010464 pgm5,LOC108442998,LOC106580555 coding upstream 83979 30635230 ~ 30641599 (-)
AMCG00010466 NA coding upstream 94074 30645325 ~ 30646374 (-)
AMCG00010465 LOC101168844,LOC107578573 coding upstream 98651 30649902 ~ 30666918 (-)
AMCG00010471 NA coding upstream 263280 30814531 ~ 30839361 (-)
G80786 NA non-coding downstream 160258 30346465 ~ 30385247 (-)
G80778 NA non-coding downstream 273840 30224925 ~ 30271665 (-)
G80777 NA non-coding downstream 286197 30253795 ~ 30259308 (-)
G80725 NA non-coding downstream 441858 30103409 ~ 30103647 (-)
G80709 NA non-coding downstream 523629 29999829 ~ 30021876 (-)
G80862 NA non-coding upstream 53263 30604514 ~ 30604750 (-)
G80901 NA non-coding upstream 183533 30734784 ~ 30737394 (-)
G81116 NA non-coding upstream 1916624 32467875 ~ 32468256 (-)
G81138 NA non-coding upstream 1974427 32525678 ~ 32530211 (-)
G81157 NA non-coding upstream 2008760 32560011 ~ 32591606 (-)
AMCG00010458 LOC107396140 other downstream 25124 30510970 ~ 30520381 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other downstream 584181 29952690 ~ 29961324 (-)
AMCG00010371 NA other downstream 4118847 26412210 ~ 26426658 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other downstream 4165758 26367932 ~ 26379747 (-)
AMCG00010343 hook3 other downstream 4989425 25516064 ~ 25556080 (-)
AMCG00010478 znf367,LOC107568105,LOC107704585 other upstream 521201 31072452 ~ 31080322 (-)
AMCG00010487 ppip5k2 other upstream 1403119 31954370 ~ 31997694 (-)
AMCG00010509 fem1c,LOC106580179 other upstream 2442036 32993287 ~ 32999999 (-)
AMCG00010532 ppic,LOC107713556 other upstream 3547095 34098346 ~ 34104672 (-)
G81716 NA other upstream 5163700 35714951 ~ 35716672 (-)

Expression


Co-expression Network