Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010491 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 32311451 ~ 32313900 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04130 | SNARE interactions in vesicular transport |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010491 | True | 679 | mRNA | 0.50 | 2 | 32311451 | 32313900 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010490 | NA | coding | downstream | 250294 | 32005161 ~ 32061157 (-) |
| AMCG00010488 | NA | coding | downstream | 363178 | 31947650 ~ 31948273 (-) |
| AMCG00010489 | NA | coding | downstream | 364070 | 31486416 ~ 31947381 (-) |
| AMCG00010481 | NA | coding | downstream | 1201247 | 31107676 ~ 31110204 (-) |
| AMCG00010482 | LOC106585187 | coding | downstream | 1204947 | 31090084 ~ 31106504 (-) |
| AMCG00010492 | NA | coding | upstream | 83264 | 32397164 ~ 32469060 (-) |
| AMCG00010498 | reep5,LOC108246451,LOC107740782 | coding | upstream | 182534 | 32496434 ~ 32508301 (-) |
| AMCG00010499 | mcc,LOC106565572 | coding | upstream | 220474 | 32534374 ~ 32578778 (-) |
| AMCG00010500 | NA | coding | upstream | 325507 | 32639407 ~ 32645904 (-) |
| AMCG00010504 | NA | coding | upstream | 589707 | 32903607 ~ 32936398 (-) |
| G80901 | NA | non-coding | downstream | 1574057 | 30734784 ~ 30737394 (-) |
| G80862 | NA | non-coding | downstream | 1706701 | 30604514 ~ 30604750 (-) |
| G80786 | NA | non-coding | downstream | 1926204 | 30346465 ~ 30385247 (-) |
| G80778 | NA | non-coding | downstream | 2039786 | 30224925 ~ 30271665 (-) |
| G81116 | NA | non-coding | upstream | 153975 | 32467875 ~ 32468256 (-) |
| G81138 | NA | non-coding | upstream | 211778 | 32525678 ~ 32530211 (-) |
| G81157 | NA | non-coding | upstream | 246111 | 32560011 ~ 32591606 (-) |
| G81258 | NA | non-coding | upstream | 840252 | 33154152 ~ 33155346 (-) |
| G81287 | NA | non-coding | upstream | 1156077 | 33469977 ~ 33517151 (-) |
| AMCG00010487 | ppip5k2 | other | downstream | 313757 | 31954370 ~ 31997694 (-) |
| AMCG00010478 | znf367,LOC107568105,LOC107704585 | other | downstream | 1231129 | 31072452 ~ 31080322 (-) |
| AMCG00010458 | LOC107396140 | other | downstream | 1791070 | 30510970 ~ 30520381 (-) |
| AMCG00010442 | LOC107672760,LOC107738293,LOC107592320 | other | downstream | 2350127 | 29952690 ~ 29961324 (-) |
| AMCG00010371 | NA | other | downstream | 5884793 | 26412210 ~ 26426658 (-) |
| AMCG00010509 | fem1c,LOC106580179 | other | upstream | 679387 | 32993287 ~ 32999999 (-) |
| AMCG00010532 | ppic,LOC107713556 | other | upstream | 1784446 | 34098346 ~ 34104672 (-) |
| G81716 | NA | other | upstream | 3401051 | 35714951 ~ 35716672 (-) |
| AMCG00010597 | ercc8 | other | upstream | 4314001 | 36627901 ~ 36641693 (-) |
| AMCG00010602 | NA | other | upstream | 4363797 | 36677697 ~ 36683818 (-) |
