AMCG00010617


Basic Information

Item Value
gene id AMCG00010617
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 37268015 ~ 37279319 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010617
ATGAGatttgatgttttaaagGGGAAGATAAGGAACAGCGTGATAAACACAAAGAGCTTCGGAGGGCATTGCAGGAAGGTGTTCAGTGGGGATCACAGCGCCTTCTTTAGACTGACACAAAATCTGATCAAATACACCTTCCAGGTGAAGGTTCAAAACGACTTCAGTGATGAGTTTTACAACAGTTCTTGGTCCTATAAAAAGCACACAGAATCTATACAGACCTCTAATTATGATGGCAACTTTCACCATGTGTTTGACAGTGAACTGACTAATGAGAAGaGCTACAGGCTGCTGGTGATCAAGAACGAGGTAGAAGTGGCACAGTTTCTGAATGGTGCCCCGGGAGACCTGACCCTCTCTGAGGAGTTCTGGAAGGAGCTGTCCTGGCTCCCCTCTGCGTATGAGTATGGTGCTTACCGGCAACTGATTGAACACTATGGGACTCACTTCATGAAGGAAGGGGCCATTGGTGGCCAGTATCAGGCTCTTCTCTACATGGATTCTGAGAAGATGAGACAGAATGGTATATCGAATAACAATGCAGAGAAATGTACTTCTTCAAGTTCTGGGTTTCTATTCTTCAGTGTTAAAAAGTCAGAGTGCAGCAAACTTGTTGAGGCACTCCGGACAGCTGAGGgaTACAAACACAATAAGGTAAATGTGAAGACATTAATTACTGGAGGGAGTGCAGGTTTTACGTCGGGCCTTAATTTGATGGATTTAAATAACCCTAGTGCGAACAGTGAACTTTATTCCAAGTGGGCCGGCTCAGTGAAGCAGAACCCATCCATCATCAAGCAGAAGCTGATGCCATTGTTTGAGCTGGTGAAAGAGGTACCCTGCGCCGGTGTGAAGAAGCACAATATGGCGCGCGCCATCGAAGAATATCTGAATGAGAGGCATGCCTGCAGGTGTAGGCCTTGCCAGAACAACGGCATCCCTATAGTCATAGGCACAGAGTGCAAATGCACTTGCAAGCCAGACACCTTCGGACACGCTTGTGAGCATGGGACGCTGCTGCAAGAACAACCAGGGGTGAGGGACGGGAGCTGGAGCTGTTGGTCTTTGTGGAGTTCCTGTTCCCAAGGTCAAAGGTCCAGGACTCGCTTGTGCAATAACCCATATCCCAGTGTGGGAGGGAAGCACTGTATAGGCGAGGCCAGAGAAGACGAGAAATGTGGAGATGAGGAGCTTCAGTATCTACGTCTTATGGAACCTCACTGCTTTGATACAACATTTGACACCGAGAAATCCTGTAAGCATCCTCCTTCATTGCAGAATGGATTTGTCCAGGATCCTAAAGCTCTATACCCGGTTGGAACTAAAATTGTGTATTCCTGCAAAGagggatattttattattggggACCCTGTAACCGAATGTGGTGAAGATTTAAGCTGGACTCTGCATCCTGTTGAGTGCAAGAGCACAGTCTGCGAGCCTCCAGATTTCCTGTCTGATGTGAAGAGCAACCCCAGGAAGCCCACTTACCAGATAGGAGACAAGATTTCAGTATCCTGCCCACCTGGGAAACAATTAGCAGGGGCTGCTGAAATCATGTGCGATTCTAGTCTCAACTGGTCCCCAGAtatcacacaaattaaatgcaatgcagtgATTGAAACCACAAAAGCACCAGTTCTGCAGTGCAAGTCATGGGAAAAGCTTGAAAACTCGCGCTGTGTGTGCAAAATGCCGTATGATTGCAAGTCATCTCTTGAAGTCTGTGCCACAAATGCAAAGACAGGTCGAACTGACATGCTCAGCGTGTGTAAGGTCCAAGCCCTGCGGTGTCTGGGGCGCGTCTACAACCTGGCCGAGAACACCGCCTGCGGCCCACCTTCCCCGAGCAAACCCTGCCCCGGCTGCCAGCTGTGGGAGAAGTGTGATGAGCACGCTAACACATGCGTGTGCAGAGAAGATGGGGAATGCGTCGAAAAGGGGGCCCACATCTGTGTCCACACTGCGGGAAGCACCGATGATGAGACGATGACCGAGTGTGAGGCAGGACACCGGAGGTGCCGGGGCGTGGAGGTCACTGTGGTCAGCACCCAGCCGTGTGAGTCCTGAGCAGCAGCGGCACCGTGGGGTTCAGCACATCTCATCTCACAGATTAAtggatgcttttatttttgtttgccattTATTCTGTATTAAGTTTACAAATACCGCTGGAAGACAACTGTAtaggctttctttttttacaattgTGTGGCTCTGTGGTGTTACATTATGTTCTATTCATGGGTAATGTGATGGTGTTTTGATCCTGAGTTTTAGCTTTGATCACTGTACATTATACTAAAGGGAAATCAGTGGAGAAGAGTAATCTTGCATAcatagaaaaatgcatttgtaacatTACAATTGAGAGGGATTCTCTTATTAAATGAAATCTACTAATGCTCCctatttggatttattttgacTAGTTTGGTCAGAtaatgaaagtgtttttgtagCTTAGCACAATAATTGGCTGTGTTCTGTTTGGGAAATGTTGTGGTTACAAAACAGTTGTTTTTCCTTGATCTATTAAGACACCGTTATTAAGCGTGCTGCTGATTAACATACACTAAGCTTGATATCCCTGTTCAAAGGGCTTTGATTAATGGCACACTCTTTGTCTCTCAACTGG

Function

GO: NA

KEGG:

id description
K03996 C7; complement component 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010617 True 2641 mRNA 0.46 14 37268015 37279319

Neighbor

gene id symbol gene type direction distance location
AMCG00010614 NA coding downstream 61934 37204218 ~ 37206081 (-)
AMCG00010613 NA coding downstream 63836 37188223 ~ 37204179 (-)
AMCG00010610 htr1a,LOC106580709,LOC107667529,LOC107565985,LOC107724885 coding downstream 97688 37169104 ~ 37170327 (-)
AMCG00010607 dimt1,dimt1l,LOC107699721 coding downstream 366743 36897269 ~ 36901272 (-)
AMCG00010606 NA coding downstream 393747 36871634 ~ 36874268 (-)
AMCG00010616 plcxd3,LOC107600019 coding upstream 4058 37283377 ~ 37299216 (-)
AMCG00010619 oxct1a,LOC107711896,LOC107686394,LOC107667551,LOC107565986,LOC105894181 coding upstream 26404 37305723 ~ 37314535 (-)
AMCG00010618 oxct1,LOC106580620 coding upstream 43135 37322454 ~ 37343422 (-)
AMCG00010625 LOC107751863,LOC107568600 coding upstream 133036 37412355 ~ 37449562 (-)
AMCG00010624 NA coding upstream 171803 37451122 ~ 37463163 (-)
G81979 NA non-coding downstream 22901 37242439 ~ 37245114 (-)
G81973 NA non-coding downstream 36640 37230447 ~ 37231375 (-)
G81957 NA non-coding downstream 138749 37128893 ~ 37129266 (-)
G81827 NA non-coding downstream 962888 36274916 ~ 36305127 (-)
G81772 NA non-coding downstream 1277381 35986996 ~ 35990634 (-)
G82002 NA non-coding upstream 3598 37282917 ~ 37283315 (-)
G82017 NA non-coding upstream 76439 37355758 ~ 37356203 (-)
G82020 NA non-coding upstream 78014 37357333 ~ 37359822 (-)
G82125 NA non-coding upstream 213404 37492723 ~ 37494713 (-)
G82126 NA non-coding upstream 218399 37497718 ~ 37498113 (-)
AMCG00010602 NA other downstream 584197 36677697 ~ 36683818 (-)
AMCG00010597 ercc8 other downstream 626322 36627901 ~ 36641693 (-)
G81716 NA other downstream 1551343 35714951 ~ 35716672 (-)
AMCG00010532 ppic,LOC107713556 other downstream 3163343 34098346 ~ 34104672 (-)
AMCG00010509 fem1c,LOC106580179 other downstream 4268016 32993287 ~ 32999999 (-)
AMCG00010623 NA other upstream 126561 37405880 ~ 37408149 (-)
AMCG00010666 NA other upstream 1144160 38423479 ~ 38425067 (-)
AMCG00010664 NA other upstream 1178455 38457774 ~ 38465061 (-)
AMCG00010667 NA other upstream 1197591 38476910 ~ 38483422 (-)
AMCG00010679 ppwd1,LOC107558664 other upstream 1355740 38635059 ~ 38636502 (-)

Expression


Co-expression Network