G79082


Basic Information

Item Value
gene id G79082
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 20292143 ~ 20292417 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98632
tcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgatccctttaagagagtgctcctaatctcagctcgttacctgtataaaagacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98632 True 220 lncRNA 0.40 2 20292143 20292417

Neighbor

gene id symbol gene type direction distance location
AMCG00010233 NA coding downstream 107717 20165996 ~ 20184426 (-)
AMCG00010232 NA coding downstream 253887 20033220 ~ 20038256 (-)
AMCG00010230 NA coding downstream 290730 19999324 ~ 20001413 (-)
AMCG00010229 arhgap24,LOC108278970 coding downstream 506651 19772619 ~ 19785492 (-)
AMCG00010225 NA coding downstream 733220 19557432 ~ 19558923 (-)
AMCG00010241 NA coding upstream 193759 20486176 ~ 20487140 (-)
AMCG00010239 hcn1,LOC106568517,LOC108278484 coding upstream 212959 20505376 ~ 20526919 (-)
AMCG00010240 hcn1,LOC107374708,LOC107085810,LOC102226223,LOC103473886 coding upstream 299319 20591736 ~ 20602373 (-)
AMCG00010242 NA coding upstream 477867 20770284 ~ 20780969 (-)
AMCG00010248 NA coding upstream 675255 20967672 ~ 20972426 (-)
G79077 NA non-coding downstream 89142 20199049 ~ 20203001 (-)
G79070 NA non-coding downstream 138169 20138766 ~ 20153974 (-)
G78998 NA non-coding downstream 527493 19725424 ~ 19764650 (-)
G78970 NA non-coding downstream 666474 19625416 ~ 19625669 (-)
G78930 kcmf1,LOC107684340,LOC107596001,LOC107691714,LOC107600595 non-coding downstream 830976 19459264 ~ 19461167 (-)
G79088 NA non-coding upstream 124373 20416790 ~ 20417002 (-)
G79092 NA non-coding upstream 174888 20467305 ~ 20467696 (-)
G79143 NA non-coding upstream 618994 20911411 ~ 20912183 (-)
G79179 NA non-coding upstream 758394 21050811 ~ 21052563 (-)
G79234 NA non-coding upstream 817170 21109587 ~ 21112212 (-)
AMCG00010234 hint2,LOC106585387,LOC107720264,LOC103469931 other downstream 96759 20188658 ~ 20195384 (-)
AMCG00010206 NA other downstream 1420061 18863268 ~ 18872082 (-)
G78610 NA other downstream 2346382 17945235 ~ 17945761 (-)
AMCG00010190 NA other downstream 2436322 17852867 ~ 17855821 (-)
AMCG00010188 NA other downstream 2447754 17840707 ~ 17844389 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other upstream 638754 20931171 ~ 20941393 (-)
AMCG00010247 NA other upstream 761207 21053624 ~ 21081825 (-)
AMCG00010262 shc3 other upstream 1248602 21541019 ~ 21572512 (-)
AMCG00010271 NA other upstream 1672112 21964529 ~ 21982050 (-)
AMCG00010288 NA other upstream 2790238 23082655 ~ 23086345 (-)

Expression


Co-expression Network