AMCG00011039


Basic Information

Item Value
gene id AMCG00011039
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8559200 ~ 8567070 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011039
ATGGACAGTGTAGATGGTGTAACACTTGCACTGAAATCCTCTGTGGAAAAGGAAATGCCTGACGGGACTTGGGCCTTTTCAATCCTTTCCAGTGAAGGCTTTCAAGGGAAATCTAGCCAGCAGAGTGAGTTGCTCTTAGATAAGCCATCTGAAGAGCCTAATGTGATCTCCCTGTCCACAAGACCTGATTCAAGCCAAATGGCAGATGCTGCTCTGAAGTCTGGTGCACAGCTTCATCAGGAGGTTTCTGTGACCTGTGGGGAGACTGCTCTGGTTGTGAGAATCAAAAATAACTTCTATGGCTTTGGTTTCCATGATGCTCGGCTAACACTGGGCTCAAGCTGTGGCAATAACAGTGTGGATTTGATCACTGGTGAACTATTGTTCAGCTACAACCTTCAGGACTGTGACAGCCAGAGGATGATCATCCCAGGGTACACAATCTACAGAAACATCCTTTACTATATTCCCAGTCAGCGATCTGGGAAAGTGGGTGGGGTACCCCGCATTAATGTTGAAATTGAATGTAGCTATAAGAGAGGGTATCCAAACACTGAAGGAGAGCAGCTGTTCATTGGCTCCTGTTATGCAACCCTGTCTGAAAACCCTCAATCATTCCCACAGTACATGATGATCGACAACTATGGCTGCATGAACCACAAGCTGGGAGCCAGTTCCAAGTTTCATCAACCCAGAGCAGATGGTGTCATCAACTTTGCCATTGATGCAAGGGAGCTCAATCTTGTGTCCAAGGTAGTAAGCCAGCTTGTGTTTGGAGGGGCTGAACCTGTCCTCTCTGCGACCTGGTCTAACATTTATTCCTCCCTCCTTTCCAAGATCTACGTCCACTGTGTCCTGTTCCTCTGCATCCAGGGAACAACTGTGCATACAAAATCTTGTAATTTTGATGCCACCAAGCAAAGATGGGAAGGCCTTGAGCTTGTGGATGGTGTCTGTGACTGCTGTGAGTCCAACTGTACTGCTCCACTCCTGACCTCCATAACTACAGATGTTAAGAGCACTGGTCCTAtattcatccaggaaggcactGCAAAGAGGACTTCTCCCACCAAGGATGCTGACCTCCTCTGGTTTCAGGTTAAAGGAGGCGATGCTGCCTACCTGCAGGATGAGTATGATCGTTCTGAAAGGGCTtatgaggaggaggaagatcaTGAAAATGACCATGAGGGGGAGCATGAAGAGTATGAAGAGCATGGAGAATATGAGGGGGAGAATGGAGAGCACGAAGAACATGAGGGAGCGTATGAAGAGAATGGAGACCATGAGGAGCACGAAGAACATGAGGGGGAGCACAAAGAGCACCAAGAGCATGAGGAGCATGGAGAACATGAGGGGGAGTATGAAAAGCATGAGGAGCATGGAGAACATGAGGGGGAATATGAAGAGCATGAGGAGCATGGAGAACATGAGGGGGAGAGCATGGAGAACATGAGGGGGAGTATGAAGAGCACCAAGAGCATGAATGGGAACATGAGGGGGACCATGAAGAGCACCAAGAACATGAGGAGCATGGAGAACATGAGGGGGAGTATGAAGAGCACCATGAACATGAGGGGGACCATGAAGAGCACGAAGAGCACCAAGAACATGAGGACCATGGAGAACATGAGAGGGAGCATGAGGACTATGAAGGGCATGGAGAACATGAGGGGCAACATGAGCATGGAGAACATGAGGGGGAGCATGAGGACTATGATGAGCACGGAGAACATGAGGGGGAGCATGAACATAAAGAAGAGTGCGAGTGGCTGCATGAGGAGGTGCAGTATGATGAACCAGCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011039 True 1809 mRNA 0.49 8 8559200 8567070

Neighbor

gene id symbol gene type direction distance location
AMCG00011037 NA coding upstream 12255 8537494 ~ 8546945 (+)
AMCG00011033 rbbp4,LOC107568807,LOC107584269,LOC105015627,LOC107709266 coding upstream 98340 8452328 ~ 8460860 (+)
AMCG00011032 NA coding upstream 125817 8427706 ~ 8433383 (+)
AMCG00011017 NA coding upstream 490836 8066837 ~ 8068364 (+)
AMCG00011020 NA coding upstream 500268 8054877 ~ 8058932 (+)
AMCG00011038 NA coding downstream 1643 8568713 ~ 8577634 (+)
AMCG00011043 NA coding downstream 77253 8644323 ~ 8654378 (+)
AMCG00011044 NA coding downstream 101989 8669059 ~ 8693522 (+)
AMCG00011045 hpcal4,LOC107691524,LOC107091490,LOC102228321,LOC107562761 coding downstream 237681 8804751 ~ 8806377 (+)
AMCG00011047 NA coding downstream 261247 8828317 ~ 8838500 (+)
G103868 NA non-coding upstream 449965 8102395 ~ 8109235 (+)
G103873 NA non-coding upstream 458182 8090966 ~ 8101018 (+)
G103850 NA non-coding upstream 489505 8061279 ~ 8069695 (+)
G103823 fam167b,LOC108234384,LOC101067225,LOC105925981 non-coding upstream 524507 8032729 ~ 8034693 (+)
G103800 hdac1,LOC107562876,LOC108272688,LOC107745719,LOC107584281 non-coding upstream 571287 7985084 ~ 7987913 (+)
G103959 NA non-coding downstream 17060 8584130 ~ 8590598 (+)
G103987 NA non-coding downstream 151878 8718948 ~ 8721777 (+)
G104004 NA non-coding downstream 278896 8845966 ~ 8857639 (+)
G104042 LOC106579881 non-coding downstream 380703 8947773 ~ 8948823 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding downstream 400808 8967878 ~ 8970770 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 6595 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 1455692 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 1638269 6892397 ~ 6920931 (+)
G103542 NA other upstream 1916572 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2163716 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 963404 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 1636547 10203617 ~ 10271863 (+)
G104273 NA other downstream 2251618 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 3076947 11644017 ~ 11651021 (+)
G104382 NA other downstream 3099128 11666198 ~ 11671340 (+)

Expression


Co-expression Network