AMCG00011048


Basic Information

Item Value
gene id AMCG00011048
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8935088 ~ 8938784 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011048
ATGGGTGTCGTCAAATTCAGGAGAGAGCAGGGTCGCAGCTATTTCCAGGATGTCCATGTGATGGTGTTCCTGGGATTTGGCTTCCTGGCGACCTTCCTTGTGAGATATGGATTCAGCAGCTCTGGATTTAACCTACTCATAGCTGTCATGGCTGTGCAGTGGGCCACGCTGCTcaatggctttttcttttcagtaaaaaatgaaaaaatccaCATTAACTTGAAGAGCCTGATCACTGCTAACCTGTGTGCAGCCTCTGCCCTCATCTCCATGGGATGCGTCCTGGGAAAGACCAACCCTGTCCAGTTACTGCTCATGGGCCTGATCGAGGTCACTGGCTTCGTCCTGAATCAGTGGATCATTCACTATTTCCTGGGCTACCATATCCACAACGCTACGCTGGCGGGAGGGGTGGCTGTAGGGGCTGCGGTCACAGTGATCCCAGAGCCTTGGATAGCCATGACCATAGGAGTCATTGCAGGACTGATCTCCACCCTGGGACTGAAGTACATTAAGCCTCACATGAAGTTTGCGTTTGATGTTCACGACACTTGCGGGGTCCTCTATGTCTTCGGTCTGCCTGGAATTATGGGATTTGTCGCCAGTATCATTCTTCAACTGGTTGCTGCCACCAACTTACTGGTGTAG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011048 True 648 mRNA 0.51 5 8935088 8938784

Neighbor

gene id symbol gene type direction distance location
AMCG00011047 NA coding upstream 96588 8828317 ~ 8838500 (+)
AMCG00011045 hpcal4,LOC107691524,LOC107091490,LOC102228321,LOC107562761 coding upstream 128711 8804751 ~ 8806377 (+)
AMCG00011044 NA coding upstream 241566 8669059 ~ 8693522 (+)
AMCG00011043 NA coding upstream 280710 8644323 ~ 8654378 (+)
AMCG00011038 NA coding upstream 357454 8568713 ~ 8577634 (+)
AMCG00011053 NA coding downstream 15422 8954206 ~ 8960198 (+)
AMCG00011056 runx3,LOC106610817 coding downstream 183613 9122397 ~ 9126585 (+)
AMCG00011055 NA coding downstream 202814 9141598 ~ 9155179 (+)
AMCG00011062 NA coding downstream 353849 9292633 ~ 9297651 (+)
AMCG00011064 NA coding downstream 387545 9326329 ~ 9344413 (+)
G104004 NA non-coding upstream 77449 8845966 ~ 8857639 (+)
G103987 NA non-coding upstream 213311 8718948 ~ 8721777 (+)
G103959 NA non-coding upstream 344490 8584130 ~ 8590598 (+)
G103868 NA non-coding upstream 825853 8102395 ~ 8109235 (+)
G103873 NA non-coding upstream 834070 8090966 ~ 8101018 (+)
G104042 LOC106579881 non-coding downstream 8989 8947773 ~ 8948823 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding downstream 29094 8967878 ~ 8970770 (+)
G104062 NA non-coding downstream 219537 9158321 ~ 9159219 (+)
G104079 NA non-coding downstream 284401 9223185 ~ 9226178 (+)
G104115 NA non-coding downstream 413589 9352373 ~ 9352587 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 382483 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 1831580 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2014157 6892397 ~ 6920931 (+)
G103542 NA other upstream 2292460 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2539604 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 591690 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 1264833 10203617 ~ 10271863 (+)
G104273 NA other downstream 1879904 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 2705233 11644017 ~ 11651021 (+)
G104382 NA other downstream 2727414 11666198 ~ 11671340 (+)

Expression


Co-expression Network