AMCG00011497


Basic Information

Item Value
gene id AMCG00011497
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 27297331 ~ 27298573 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011497
GAGCCCGAGAGGCTGGGTATAAAGCCTGGGTCACAGGAAACCGCGGCGCACTCACTCGCAGGGACTAAAGCAACCGGTGGCGGACAGAAACCGGGTTGGAGGATGAAGGCAACATCCCATAACGCATCATCATACCCAGCGCCGTGGGCTCCCATCAAAGTGCCAGCGACCAGAATGACGCACAAAAGTCCTTTCAGCATCGAGGCGATCCTCTCCATGGGGCCCCGGGAGCTCGTCCAGCACAGCCCGGCGGTGTGGGGTGAGCAGCGGGGGCACAGCTACCCGGCCACGCCGGCTCTGCCCCTGTGGCTTCCAGCGGGACCCTCCCAGCCGAGCGCGCCCTACTGCCACTATTACACAGGATACCAGCCACAGCTGCTGAGCAAGGGTTATGATCCGAATGGGAAACTGATGTCCAAGAAGAATTATGTGCGGAGAACCTGCCGCAGGATAAGAACCATCTTCACCGACGAGCAGCTCAGGAGGCTGGAGGAGGTGTTCAGCAAGCAGCGCTACATGACGGGCACGGAGAAGGTGCTCCTGGCCTCGGCGCTGCAGCTCACCGAGACGCAGGTGAAGGTCTGGTTCCAGAACAGGAGGACCAGGTGGaggaagacccaggaggacaaGGGTGTCCGCCCGCAGGAGAGGGACAGCAGCCCCGGCCCGGACAGCAGCTCCGCCGTCAGCGGGGAAGATGAAGAAAACGAGCTCATCTCCGTGGATGAAGGCAATTCGTGGCCATTTTGAGAGGATAAATCAGGACTATAAGCCACTCTATATTGacttttttatatgtatatcgttgatttatattttttctctcaacCATACAGTTATTATGCTATGTGCAAAATAGTGTATGTACTTAATTCTTGTTAAACAAGACTGTATATTCACTGTACAGGGTATTTCAGGTTCTTCCACTGTGTGGATTTGCGCTGCCTTattccttttcaaataaaagtttaaactGAC

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process

KEGG:

id description
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011497 True 978 mRNA 0.54 2 27297331 27298573

Neighbor

gene id symbol gene type direction distance location
AMCG00011498 b4galt7,LOC106612238 coding upstream 1508 27288443 ~ 27295823 (+)
AMCG00011496 tmed9,LOC108416549 coding upstream 13903 27280170 ~ 27283428 (+)
AMCG00011495 lman2 coding upstream 18023 27271598 ~ 27279308 (+)
AMCG00011494 htr4,LOC108269380 coding upstream 101683 27188551 ~ 27195648 (+)
AMCG00011493 NA coding upstream 229954 27058992 ~ 27067377 (+)
AMCG00011499 emx3,LOC107664735,LOC107563604,LOC108416560,LOC107598366 coding downstream 23099 27321672 ~ 27323945 (+)
AMCG00011500 rmnd5b,LOC105026275,LOC100306854,LOC106612137 coding downstream 174058 27472631 ~ 27481990 (+)
AMCG00011502 NA coding downstream 185615 27484188 ~ 27496643 (+)
AMCG00011505 NA coding downstream 257727 27556300 ~ 27583803 (+)
AMCG00011504 hand1,LOC106603969 coding downstream 293082 27591655 ~ 27595004 (+)
G107128 NA non-coding upstream 845756 26447202 ~ 26451575 (+)
G107126 NA non-coding upstream 909347 26387748 ~ 26387984 (+)
G107098 NA non-coding upstream 1004884 26277374 ~ 26292447 (+)
G107084 NA non-coding upstream 1094712 26199950 ~ 26202619 (+)
G107004 ergic1 non-coding upstream 1408493 25882692 ~ 25888838 (+)
G107321 NA non-coding downstream 168831 27467404 ~ 27468567 (+)
G107331 NA non-coding downstream 198754 27497327 ~ 27501442 (+)
G107382 NA non-coding downstream 315388 27613961 ~ 27615738 (+)
G107402 NA non-coding downstream 492293 27790866 ~ 27874138 (+)
G107408 NA non-coding downstream 584522 27883095 ~ 27883396 (+)
AMCG00011488 NA other upstream 454539 26818052 ~ 26842792 (+)
G107202 NA other upstream 526117 26770438 ~ 26771214 (+)
AMCG00011476 NA other upstream 936556 26356167 ~ 26360775 (+)
AMCG00011455 unc5a,LOC107677380,LOC107653334 other upstream 1635152 25607986 ~ 25662179 (+)
AMCG00011430 dctn4,LOC107749746,LOC106604160 other upstream 3452420 23835819 ~ 23844911 (+)
G107394 NA other downstream 413633 27712206 ~ 27727867 (+)
AMCG00011519 NA other downstream 1570569 28869142 ~ 28876355 (+)
G107741 NA other downstream 2399028 29697601 ~ 29699419 (+)
G107784 NA other downstream 2559397 29857970 ~ 29875476 (+)
G107858 NA other downstream 2873215 30171788 ~ 30212090 (+)

Expression


Co-expression Network