AMCG00012018


Basic Information

Item Value
gene id AMCG00012018
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8739577 ~ 8748073 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012018
agTGTTTAAAGGACATTCATACCGCCTTGTATGGGCAAAGTGAGCGGCTGAAGCATTCCATATTGTCTGGAGACTAACTTCCTCCTGACTCTTCCTGTGTGCCTGTCAAGTTGTGGCTTATATTGTGTAAGTTTACATCGAAGGAGACCCACCAGGAGTCAGAGAAAATTtacagATCTCataattcattaaacaaaacagctaCCAAAACCCTCACCATGCCAGTTGTAAGCACCACATTGAAGGCAACGCCCTTGCTCTTTGCCCGCATAGCAGCAATAATCTTCACCTGCGTGGCCTTCAGCGTGGCGGTCCATGGTGGCCAAGTCTCTCATGGCACTGCCGACTGGTGCATGTTCTGCTGGTGCTTCAGCTTCGCGGGCTCCCTGCTGGTGATACTCGTGGAGCTGTTTGGTCTGCAGACCCGTGCGCCCGTCTCCTGGCGCAACTTCCCCATCACTTTCGCCTGCTATGCCTCCCTGTTTTGTCTCTCGGCCTCGATCATCTGGCCCCTTTACTTCATCAAGGGGACACACTCCTCGGACCAGGTGCGCAACTATCGCATCACCACCACCGTCTTCTCCGTCCTCGCCACCATCGCCTACATCTGTGAAGTGTCCATCAGCAAAGCTCGGCCCGGGGAAGTGGCCGGCTACATGGCCACGGCCCCCGGCATCCTAAAGGTGTGCGAGACCTTCGTTGCCTGTGTCATTTTCGTGTTCATCAGTGACCCGATCGCCTACGACAGCCACGAAGCCCTGAAATGGTGCCTGGCGGTATACTGCATCTGCTTCATCCTGTCGGCAGCCAtcattgtgctgtgtgtgggcGAGTGCACCGGCTGCCTGCCCTTCCCCTTCGCCCGCTTCCTCAGTGCCTACGCCCTGCTGGCCGTGCTGATGTACGCCTCAGCCACCATCATCTGGCCCATCTACAAGTTCGACAGGAAACACGGAGGGCAACCCAGTCGTACCTCTGACTGCGGTCGCTACAGCGGACTCTGTTCATGGGACAAGATGGTGGCTGTCTCCGTCCTCACTGCCCTTAATTTCATCCTCTACCTGGCCGACCTCTTCTACTCGGCTCGCCTGATCTTCGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012018 True 1103 mRNA 0.56 3 8739577 8748073

Neighbor

gene id symbol gene type direction distance location
AMCG00012017 NA coding downstream 28806 8703782 ~ 8710771 (-)
AMCG00012012 pea15 coding downstream 111902 8626155 ~ 8627675 (-)
AMCG00012013 NA coding downstream 122489 8613948 ~ 8617088 (-)
AMCG00012009 NA coding downstream 264527 8474106 ~ 8475050 (-)
AMCG00012003 NA coding downstream 385202 8349300 ~ 8354375 (-)
AMCG00012020 NA coding upstream 48067 8796140 ~ 8805330 (-)
AMCG00012027 NA coding upstream 159609 8907682 ~ 8928638 (-)
AMCG00012033 NA coding upstream 252629 9000702 ~ 9002383 (-)
AMCG00012034 NA coding upstream 314498 9062571 ~ 9072513 (-)
AMCG00012040 NA coding upstream 340779 9088852 ~ 9118322 (-)
G133997 NA non-coding downstream 255920 8430988 ~ 8483657 (-)
G133915 NA non-coding downstream 550884 8188289 ~ 8188693 (-)
G133891 NA non-coding downstream 687332 8004018 ~ 8052245 (-)
G133714 NA non-coding downstream 1164430 7551295 ~ 7575147 (-)
G133607 NA non-coding downstream 1602053 7135868 ~ 7137524 (-)
G134069 NA non-coding upstream 54334 8802407 ~ 8802986 (-)
G134143 NA non-coding upstream 406363 9154436 ~ 9191292 (-)
G134226 NA non-coding upstream 666243 9414316 ~ 9416458 (-)
G134298 NA non-coding upstream 908283 9656356 ~ 9656645 (-)
G134396 NA non-coding upstream 1044237 9792310 ~ 9799446 (-)
G134036 NA other downstream 37936 8699411 ~ 8701641 (-)
G134005 NA other downstream 174313 8489200 ~ 8565264 (-)
AMCG00011995 NA other downstream 679701 8047229 ~ 8059876 (-)
AMCG00011974 NA other downstream 1063346 7651556 ~ 7676231 (-)
G133715 NA other downstream 1182869 7545355 ~ 7556708 (-)
G134119 NA other upstream 392751 9140824 ~ 9145295 (-)
G134244 NA other upstream 787195 9535268 ~ 9538892 (-)
AMCG00012058 NA other upstream 864406 9612479 ~ 9626126 (-)
G134395 NA other upstream 1042768 9790841 ~ 9791348 (-)
G134397 NA other upstream 1061725 9809798 ~ 10244924 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_15631508_15632389 NA coding CI01000004 null 15631430 ~ 15632403 (+)