G131942


Basic Information

Item Value
gene id G131942
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2463991 ~ 2464606 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165468
gtgcAGGACTCTCCCCAGCGGGAGCACGATCCACCGCCCCAGAGCAACACGATCTGCGCTGTGCGCTGGAAGGTGACGGATGAGGAACTGCAGGCGCACAGCTCGGCACCCACAAGCAAACCCGGCCGCAAACTGAACAGCAGTAGACAGCAGaaCCCACGTCAGAAGAGCCTGCAGGACCTGCGCAGCCTGGAGGAGTGTGTGCGCTTCATCAACCAGTGGAAGGAGCAGGTGGACCGGGTCTGCAAG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU165468 True 249 lncRNA 0.63 2 2463991 2464606

Neighbor

gene id symbol gene type direction distance location
AMCG00011694 NA coding upstream 17031 2433022 ~ 2446960 (+)
AMCG00011696 ybx2,LOC104945427 coding upstream 59973 2398246 ~ 2404018 (+)
AMCG00011689 NA coding upstream 79535 2377098 ~ 2384456 (+)
AMCG00011687 NA coding upstream 92090 2367233 ~ 2371901 (+)
AMCG00011688 NA coding upstream 121410 2339755 ~ 2342581 (+)
AMCG00011704 NA coding downstream 54666 2519272 ~ 2527047 (+)
AMCG00011701 NA coding downstream 66742 2531348 ~ 2537461 (+)
AMCG00011706 NA coding downstream 155022 2619628 ~ 2631060 (+)
AMCG00011705 NA coding downstream 172491 2637097 ~ 2638618 (+)
AMCG00011714 NA coding downstream 269583 2734189 ~ 2744573 (+)
G131941 NA non-coding upstream 1641 2462145 ~ 2462350 (+)
G131908 NA non-coding upstream 136259 2327120 ~ 2327732 (+)
G131893 NA non-coding upstream 163418 2300343 ~ 2300573 (+)
G131892 NA non-coding upstream 164530 2299149 ~ 2299461 (+)
G131891 NA non-coding upstream 164879 2298824 ~ 2299112 (+)
G131983 NA non-coding downstream 169725 2634331 ~ 2634950 (+)
G131988 NA non-coding downstream 180942 2645548 ~ 2647440 (+)
G131992 NA non-coding downstream 196651 2661257 ~ 2661551 (+)
G132215 NA non-coding downstream 524140 2988746 ~ 2989007 (+)
G132268 NA non-coding downstream 639554 3104160 ~ 3115307 (+)
AMCG00011695 NA other upstream 2266 2451363 ~ 2461725 (+)
G131898 bola2,LOC105020731,LOC105907194,LOC108436240,LOC104959592 other upstream 143958 2318010 ~ 2320033 (+)
AMCG00011676 NA other upstream 197187 2252818 ~ 2266804 (+)
G131805 NA other upstream 251489 2207901 ~ 2212502 (+)
AMCG00011671 NA other upstream 278118 2166167 ~ 2185873 (+)
AMCG00011702 NA other downstream 77189 2541795 ~ 2551037 (+)
G131981 neurl4,LOC102791343 other downstream 150847 2615453 ~ 2616061 (+)
AMCG00011713 LOC107377402,LOC101163851,LOC108249525,LOC106525311 other downstream 226933 2691539 ~ 2700390 (+)
AMCG00011718 naa38,lsmd1 other downstream 388211 2852817 ~ 2858284 (+)
G132058 NA other downstream 412668 2877274 ~ 2880260 (+)

Expression


Co-expression Network