G132215


Basic Information

Item Value
gene id G132215
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2988746 ~ 2989007 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165794
aattactacatttcttagcagaagcccttatcctgggtgatttacaatatattatatataaacaatgcaGCCTCTAGGGCAGGGATGGCAAACTTTTTTTGGCTGGAGAGGCCAAAGCCAGTTTGTTTACATCGCAAAGTGCCAAGGGTTCCAATTAAACATTAGGGATTTATACAAGGGAGATTAAATAGGGGCTAAACAGCaaatttttaaaacatacactcacctaaaggattattaggaacaccatactaatactgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165794 True 262 lncRNA 0.37 1 2988746 2989007

Neighbor

gene id symbol gene type direction distance location
AMCG00011724 NA coding upstream 13915 2964230 ~ 2974831 (+)
AMCG00011723 NA coding upstream 50572 2930262 ~ 2938174 (+)
AMCG00011717 NA coding upstream 177083 2805091 ~ 2811663 (+)
AMCG00011712 LOC105031478 coding upstream 206448 2777860 ~ 2782298 (+)
AMCG00011714 NA coding upstream 244173 2734189 ~ 2744573 (+)
AMCG00011733 NA coding downstream 80834 3069841 ~ 3074129 (+)
AMCG00011740 NA coding downstream 121605 3110612 ~ 3111553 (+)
AMCG00011738 her8a,LOC105027206,LOC107666285,LOC107750660,LOC107563304,LOC108443965 coding downstream 137517 3126524 ~ 3128860 (+)
AMCG00011737 LOC105891152 coding downstream 152435 3141442 ~ 3152046 (+)
AMCG00011739 NA coding downstream 174907 3163914 ~ 3168954 (+)
G131992 NA non-coding upstream 327195 2661257 ~ 2661551 (+)
G131988 NA non-coding upstream 341306 2645548 ~ 2647440 (+)
G131983 NA non-coding upstream 353796 2634331 ~ 2634950 (+)
G131942 NA non-coding upstream 524140 2463991 ~ 2464606 (+)
G131941 NA non-coding upstream 526396 2462145 ~ 2462350 (+)
G132268 NA non-coding downstream 115153 3104160 ~ 3115307 (+)
G132270 NA non-coding downstream 180731 3169738 ~ 3250107 (+)
G132293 NA non-coding downstream 249479 3238486 ~ 3245852 (+)
G132433 NA non-coding downstream 578880 3567887 ~ 3568440 (+)
G132466 NA non-coding downstream 680674 3669681 ~ 3672437 (+)
G132072 NA other upstream 47575 2938370 ~ 2941171 (+)
G132058 NA other upstream 108486 2877274 ~ 2880260 (+)
AMCG00011718 naa38,lsmd1 other upstream 130462 2852817 ~ 2858284 (+)
AMCG00011713 LOC107377402,LOC101163851,LOC108249525,LOC106525311 other upstream 288356 2691539 ~ 2700390 (+)
G131981 neurl4,LOC102791343 other upstream 372685 2615453 ~ 2616061 (+)
G132221 NA other downstream 12425 3001432 ~ 3004662 (+)
AMCG00011735 NA other downstream 89410 3078417 ~ 3101137 (+)
G132271 NA other downstream 212367 3201374 ~ 3204597 (+)
AMCG00011770 NA other downstream 903374 3892381 ~ 3897596 (+)
AMCG00011771 NA other downstream 914668 3903675 ~ 3977662 (+)

Expression


Co-expression Network