G131988


Basic Information

Item Value
gene id G131988
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2645548 ~ 2647440 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165518
GCAGCATTTACTGTACAAGGATTTCGCTCAGGCCTACAAAATGAGACGGTCCTGTTaggttttaattcatttttttttttttttttttcttttaatacaaattCCAAAAAGGCAATTGCTAACTGCTGCCTTGAtataaccccccctcccccaaatacatacataaataaaataacaaataaataaataaataaataaataaaataaaaaagcaacaatgttGAACCCAAGACAGGAACAGCGCCTTTCTGTGCTACAGatgaaacaaaagtgaaaacGAGACACACAGACGAAAAatccaataaatacaaataaataaatacataaataaagcaaaagctCTCTTGAACGATCtaccaaaagtattttttaatatactcCAAAGCTGTCTTCTGTGGTCTGCCTCTATACTGGCCAGTCTATATTCCCCGCTCTACGGTCTCCCCAGCAAAAacagaatcaaatcaaatcaaatcaaacaaaacacgATCGAGTGGAAGCTGCTCCCTCTCAGTCGCACCAATTCACAGCATCGTCATCACTGCCGTTACTATTATCACTACGTTTCCTGTAATTCAGACTTTCCCTGCGAACTACTTCCCATCAACAGAAGTGCATAAAAATCAAGACCCATCCGCCAACCCCAGCGTATAAATTCCACGGGCGGATAAGATAAATGTCCatattaagataaataaaataaccgGCCGATGCAGTTGGACTACCCGGGAACTACCGTCTCTTGGGATCTGCGGCCGACAGGAAGTGGGAAACCGTACGCCCGCTATTTGATTCCCCTTCTTTATCCCGGAGCAcgaaaataaacttaaaaaataaaagttcacacataaataaaaacaagccgCTCGTCTTCACAGGATACACAACCGGTGTCGCACGCGGGAGGAACTTCCCCCGATGTGCAGCGTTCTCCGTGAAACCGGCgaagttttttaattttttttgcgACGTCGGCCGGTGCTGAGCTTAGGCTCGCGGCGGGCGGTTTTCCGAAACAGaccaacaaaaactaaaatcacgGCTGGCCAAAACCCTTCCGAGAGCCTCTTCCTCGTAAACAGAACTCTCGATCTAACACGAGTCGATCGTTTTGAATTTAGCGCaccaccatgttttttttttttcatgattttataatttttttctcaatatTTACAAATCGCCTactgcatttctttaaaaaaattactaacgaacaaacaaaaaaacgcgCAGATAATCAGTATTAACCCCACGGGAGGAATCCCTTCTGATCTCAGCGATTGATCTCGTGGATTCCCCTTCGTCATGAGATGCCTCCCTCAAAATCATCTTTGCTTTTTTAGTTTGTCTCGTTTTCCTCAGGATTGTAAATGTGTGCTTTTCAGTGCTGCCAGCCGTTTATGgctctaaaataaaaaatataaaatgttctatatatttatactatatataggGGAAAAAAACGAGCTAGAGAACTGGCTTGGCAAcagtatgagagagagagagaaaatgtactGATAGTATGGCTTATTGTGATGACCagcacacacagggacacaggtgGAGACGACGGGGAGGGAAACAAATGAGAGATTTGTAAACGTAAGAGTTGGAAATCAGAGCGGGAGTGGAGAGAGCCCTGGTCTCCTGCTTACATCTCCGGCAAAGAAACCGTCACGGACATAAACaaactattaattaattcatacattaaaaaacgTGATTtggtcttttgtatttttttgatGCCCTCTCTTGACTCTTCTAGTCTGTGGTCCCGTCGGACTGATCACCCGTCTCCTCAATTTGGGAGAGGACTTTTTCTAGTTTGAAGAAGACCAAACGacgatctatatatatatatatatatacactcacctaaaggattat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165518 True 1893 lncRNA 0.40 1 2645548 2647440

Neighbor

gene id symbol gene type direction distance location
AMCG00011705 NA coding upstream 6930 2637097 ~ 2638618 (+)
AMCG00011706 NA coding upstream 14488 2619628 ~ 2631060 (+)
AMCG00011701 NA coding upstream 108087 2531348 ~ 2537461 (+)
AMCG00011704 NA coding upstream 118501 2519272 ~ 2527047 (+)
AMCG00011694 NA coding upstream 198588 2433022 ~ 2446960 (+)
AMCG00011714 NA coding downstream 86749 2734189 ~ 2744573 (+)
AMCG00011712 LOC105031478 coding downstream 130420 2777860 ~ 2782298 (+)
AMCG00011717 NA coding downstream 157651 2805091 ~ 2811663 (+)
AMCG00011723 NA coding downstream 282822 2930262 ~ 2938174 (+)
AMCG00011724 NA coding downstream 316790 2964230 ~ 2974831 (+)
G131983 NA non-coding upstream 10598 2634331 ~ 2634950 (+)
G131942 NA non-coding upstream 180942 2463991 ~ 2464606 (+)
G131941 NA non-coding upstream 183198 2462145 ~ 2462350 (+)
G131908 NA non-coding upstream 317816 2327120 ~ 2327732 (+)
G131893 NA non-coding upstream 344975 2300343 ~ 2300573 (+)
G131992 NA non-coding downstream 13817 2661257 ~ 2661551 (+)
G132215 NA non-coding downstream 341306 2988746 ~ 2989007 (+)
G132268 NA non-coding downstream 456720 3104160 ~ 3115307 (+)
G132270 NA non-coding downstream 522298 3169738 ~ 3250107 (+)
G132293 NA non-coding downstream 591046 3238486 ~ 3245852 (+)
G131981 neurl4,LOC102791343 other upstream 29487 2615453 ~ 2616061 (+)
AMCG00011702 NA other upstream 94511 2541795 ~ 2551037 (+)
AMCG00011695 NA other upstream 183823 2451363 ~ 2461725 (+)
G131898 bola2,LOC105020731,LOC105907194,LOC108436240,LOC104959592 other upstream 325515 2318010 ~ 2320033 (+)
AMCG00011676 NA other upstream 378744 2252818 ~ 2266804 (+)
AMCG00011713 LOC107377402,LOC101163851,LOC108249525,LOC106525311 other downstream 44099 2691539 ~ 2700390 (+)
AMCG00011718 naa38,lsmd1 other downstream 205377 2852817 ~ 2858284 (+)
G132058 NA other downstream 229834 2877274 ~ 2880260 (+)
G132072 NA other downstream 290930 2938370 ~ 2941171 (+)
G132221 NA other downstream 353992 3001432 ~ 3004662 (+)

Expression


Co-expression Network